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Intracluster correlation coefficients in the Greater Mekong Subregion for sample size calculations of cluster randomized malaria trials

BACKGROUND: Sample size calculations for cluster randomized trials are a recognized methodological challenge for malaria research in pre-elimination settings. Positively correlated responses from the participants in the same cluster are a key feature in the estimated sample size required for a clust...

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Autores principales: Peerawaranun, Pimnara, Landier, Jordi, Nosten, Francois H., Nguyen, Thuy-Nhien, Hien, Tran Tinh, Tripura, Rupam, Peto, Thomas J., Phommasone, Koukeo, Mayxay, Mayfong, Day, Nicholas P. J., Dondorp, Arjen, White, Nick, von Seidlein, Lorenz, Mukaka, Mavuto
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6921387/
https://www.ncbi.nlm.nih.gov/pubmed/31852499
http://dx.doi.org/10.1186/s12936-019-3062-x
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author Peerawaranun, Pimnara
Landier, Jordi
Nosten, Francois H.
Nguyen, Thuy-Nhien
Hien, Tran Tinh
Tripura, Rupam
Peto, Thomas J.
Phommasone, Koukeo
Mayxay, Mayfong
Day, Nicholas P. J.
Dondorp, Arjen
White, Nick
von Seidlein, Lorenz
Mukaka, Mavuto
author_facet Peerawaranun, Pimnara
Landier, Jordi
Nosten, Francois H.
Nguyen, Thuy-Nhien
Hien, Tran Tinh
Tripura, Rupam
Peto, Thomas J.
Phommasone, Koukeo
Mayxay, Mayfong
Day, Nicholas P. J.
Dondorp, Arjen
White, Nick
von Seidlein, Lorenz
Mukaka, Mavuto
author_sort Peerawaranun, Pimnara
collection PubMed
description BACKGROUND: Sample size calculations for cluster randomized trials are a recognized methodological challenge for malaria research in pre-elimination settings. Positively correlated responses from the participants in the same cluster are a key feature in the estimated sample size required for a cluster randomized trial. The degree of correlation is measured by the intracluster correlation coefficient (ICC) where a higher coefficient suggests a closer correlation hence less heterogeneity within clusters but more heterogeneity between clusters. METHODS: Data on uPCR-detected Plasmodium falciparum and Plasmodium vivax infections from a recent cluster randomized trial which aimed at interrupting malaria transmission through mass drug administrations were used to calculate the ICCs for prevalence and incidence of Plasmodium infections. The trial was conducted in four countries in the Greater Mekong Subregion, Laos, Myanmar, Vietnam and Cambodia. Exact and simulation approaches were used to estimate ICC values for both the prevalence and the incidence of parasitaemia. In addition, the latent variable approach to estimate ICCs for the prevalence was utilized. RESULTS: The ICCs for prevalence ranged between 0.001 and 0.082 for all countries. The ICC from the combined 16 villages in the Greater Mekong Subregion were 0.26 and 0.21 for P. falciparum and P. vivax respectively. The ICCs for incidence of parasitaemia ranged between 0.002 and 0.075 for Myanmar, Cambodia and Vietnam. There were very high ICCs for incidence in the range of 0.701 to 0.806 in Laos during follow-up. CONCLUSION: ICC estimates can help researchers when designing malaria cluster randomized trials. A high variability in ICCs and hence sample size requirements between study sites was observed. Realistic sample size estimates for cluster randomized malaria trials in the Greater Mekong Subregion have to assume high between cluster heterogeneity and ICCs. This work focused on uPCR-detected infections; there remains a need to develop more ICC references for trials designed around prevalence and incidence of clinical outcomes. Adequately powered trials are critical to estimate the benefit of interventions to malaria in a reliable and reproducible fashion. Trial registration: ClinicalTrials.govNCT01872702. Registered 7 June 2013. Retrospectively registered. https://clinicaltrials.gov/ct2/show/NCT01872702
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spelling pubmed-69213872019-12-30 Intracluster correlation coefficients in the Greater Mekong Subregion for sample size calculations of cluster randomized malaria trials Peerawaranun, Pimnara Landier, Jordi Nosten, Francois H. Nguyen, Thuy-Nhien Hien, Tran Tinh Tripura, Rupam Peto, Thomas J. Phommasone, Koukeo Mayxay, Mayfong Day, Nicholas P. J. Dondorp, Arjen White, Nick von Seidlein, Lorenz Mukaka, Mavuto Malar J Methodology BACKGROUND: Sample size calculations for cluster randomized trials are a recognized methodological challenge for malaria research in pre-elimination settings. Positively correlated responses from the participants in the same cluster are a key feature in the estimated sample size required for a cluster randomized trial. The degree of correlation is measured by the intracluster correlation coefficient (ICC) where a higher coefficient suggests a closer correlation hence less heterogeneity within clusters but more heterogeneity between clusters. METHODS: Data on uPCR-detected Plasmodium falciparum and Plasmodium vivax infections from a recent cluster randomized trial which aimed at interrupting malaria transmission through mass drug administrations were used to calculate the ICCs for prevalence and incidence of Plasmodium infections. The trial was conducted in four countries in the Greater Mekong Subregion, Laos, Myanmar, Vietnam and Cambodia. Exact and simulation approaches were used to estimate ICC values for both the prevalence and the incidence of parasitaemia. In addition, the latent variable approach to estimate ICCs for the prevalence was utilized. RESULTS: The ICCs for prevalence ranged between 0.001 and 0.082 for all countries. The ICC from the combined 16 villages in the Greater Mekong Subregion were 0.26 and 0.21 for P. falciparum and P. vivax respectively. The ICCs for incidence of parasitaemia ranged between 0.002 and 0.075 for Myanmar, Cambodia and Vietnam. There were very high ICCs for incidence in the range of 0.701 to 0.806 in Laos during follow-up. CONCLUSION: ICC estimates can help researchers when designing malaria cluster randomized trials. A high variability in ICCs and hence sample size requirements between study sites was observed. Realistic sample size estimates for cluster randomized malaria trials in the Greater Mekong Subregion have to assume high between cluster heterogeneity and ICCs. This work focused on uPCR-detected infections; there remains a need to develop more ICC references for trials designed around prevalence and incidence of clinical outcomes. Adequately powered trials are critical to estimate the benefit of interventions to malaria in a reliable and reproducible fashion. Trial registration: ClinicalTrials.govNCT01872702. Registered 7 June 2013. Retrospectively registered. https://clinicaltrials.gov/ct2/show/NCT01872702 BioMed Central 2019-12-18 /pmc/articles/PMC6921387/ /pubmed/31852499 http://dx.doi.org/10.1186/s12936-019-3062-x Text en © The Author(s) 2019 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Methodology
Peerawaranun, Pimnara
Landier, Jordi
Nosten, Francois H.
Nguyen, Thuy-Nhien
Hien, Tran Tinh
Tripura, Rupam
Peto, Thomas J.
Phommasone, Koukeo
Mayxay, Mayfong
Day, Nicholas P. J.
Dondorp, Arjen
White, Nick
von Seidlein, Lorenz
Mukaka, Mavuto
Intracluster correlation coefficients in the Greater Mekong Subregion for sample size calculations of cluster randomized malaria trials
title Intracluster correlation coefficients in the Greater Mekong Subregion for sample size calculations of cluster randomized malaria trials
title_full Intracluster correlation coefficients in the Greater Mekong Subregion for sample size calculations of cluster randomized malaria trials
title_fullStr Intracluster correlation coefficients in the Greater Mekong Subregion for sample size calculations of cluster randomized malaria trials
title_full_unstemmed Intracluster correlation coefficients in the Greater Mekong Subregion for sample size calculations of cluster randomized malaria trials
title_short Intracluster correlation coefficients in the Greater Mekong Subregion for sample size calculations of cluster randomized malaria trials
title_sort intracluster correlation coefficients in the greater mekong subregion for sample size calculations of cluster randomized malaria trials
topic Methodology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6921387/
https://www.ncbi.nlm.nih.gov/pubmed/31852499
http://dx.doi.org/10.1186/s12936-019-3062-x
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