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Ghost hunting in the nonlinear dynamic machine
Integrating dynamic systems modeling and machine learning generates an exploratory nonlinear solution for analyzing dynamical systems-based data. Applying dynamical systems theory to the machine learning solution further provides a pathway to interpret the results. Using random forest models as an i...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6922341/ https://www.ncbi.nlm.nih.gov/pubmed/31856235 http://dx.doi.org/10.1371/journal.pone.0226572 |
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author | Butner, Jonathan E. Munion, Ascher K. Baucom, Brian R. W. Wong, Alexander |
author_facet | Butner, Jonathan E. Munion, Ascher K. Baucom, Brian R. W. Wong, Alexander |
author_sort | Butner, Jonathan E. |
collection | PubMed |
description | Integrating dynamic systems modeling and machine learning generates an exploratory nonlinear solution for analyzing dynamical systems-based data. Applying dynamical systems theory to the machine learning solution further provides a pathway to interpret the results. Using random forest models as an illustrative example, these models were able to recover the temporal dynamics of time series data simulated using a modified Cusp Catastrophe Monte Carlo. By extracting the points of no change (set points) and the predicted changes surrounding the set points, it is possible to characterize the topology of the system, both for systems governed by global equation forms and complex adaptive systems. RESULTS: The model for the simulation was able to recover the cusp catastrophe (i.e. the qualitative changes in the dynamics of the system) even when applied to data that have a significant amount of error variance. To further illustrate the approach, a real-world accelerometer example was examined, where the model differentiated between movement dynamics patterns by identifying set points related to cyclic motion during walking and attraction during stair climbing. These example findings suggest that integrating machine learning with dynamical systems modeling provides a viable means for classifying distinct temporal patterns, even when there is no governing equation for the nonlinear dynamics. Results of these integrated models yield solutions with both a prediction of where the system is going next and a decomposition of the topological features implied by the temporal dynamics. |
format | Online Article Text |
id | pubmed-6922341 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-69223412020-01-07 Ghost hunting in the nonlinear dynamic machine Butner, Jonathan E. Munion, Ascher K. Baucom, Brian R. W. Wong, Alexander PLoS One Research Article Integrating dynamic systems modeling and machine learning generates an exploratory nonlinear solution for analyzing dynamical systems-based data. Applying dynamical systems theory to the machine learning solution further provides a pathway to interpret the results. Using random forest models as an illustrative example, these models were able to recover the temporal dynamics of time series data simulated using a modified Cusp Catastrophe Monte Carlo. By extracting the points of no change (set points) and the predicted changes surrounding the set points, it is possible to characterize the topology of the system, both for systems governed by global equation forms and complex adaptive systems. RESULTS: The model for the simulation was able to recover the cusp catastrophe (i.e. the qualitative changes in the dynamics of the system) even when applied to data that have a significant amount of error variance. To further illustrate the approach, a real-world accelerometer example was examined, where the model differentiated between movement dynamics patterns by identifying set points related to cyclic motion during walking and attraction during stair climbing. These example findings suggest that integrating machine learning with dynamical systems modeling provides a viable means for classifying distinct temporal patterns, even when there is no governing equation for the nonlinear dynamics. Results of these integrated models yield solutions with both a prediction of where the system is going next and a decomposition of the topological features implied by the temporal dynamics. Public Library of Science 2019-12-19 /pmc/articles/PMC6922341/ /pubmed/31856235 http://dx.doi.org/10.1371/journal.pone.0226572 Text en © 2019 Butner et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Butner, Jonathan E. Munion, Ascher K. Baucom, Brian R. W. Wong, Alexander Ghost hunting in the nonlinear dynamic machine |
title | Ghost hunting in the nonlinear dynamic machine |
title_full | Ghost hunting in the nonlinear dynamic machine |
title_fullStr | Ghost hunting in the nonlinear dynamic machine |
title_full_unstemmed | Ghost hunting in the nonlinear dynamic machine |
title_short | Ghost hunting in the nonlinear dynamic machine |
title_sort | ghost hunting in the nonlinear dynamic machine |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6922341/ https://www.ncbi.nlm.nih.gov/pubmed/31856235 http://dx.doi.org/10.1371/journal.pone.0226572 |
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