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Agar plate‐based screening methods for the identification of polyester hydrolysis by Pseudomonas species

Hydrolases acting on polyesters like cutin, polycaprolactone or polyethylene terephthalate (PET) are of interest for several biotechnological applications like waste treatment, biocatalysis and sustainable polymer modifications. Recent studies suggest that a large variety of such enzymes are still t...

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Autores principales: Molitor, Rebecka, Bollinger, Alexander, Kubicki, Sonja, Loeschcke, Anita, Jaeger, Karl‐Erich, Thies, Stephan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6922526/
https://www.ncbi.nlm.nih.gov/pubmed/31016871
http://dx.doi.org/10.1111/1751-7915.13418
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author Molitor, Rebecka
Bollinger, Alexander
Kubicki, Sonja
Loeschcke, Anita
Jaeger, Karl‐Erich
Thies, Stephan
author_facet Molitor, Rebecka
Bollinger, Alexander
Kubicki, Sonja
Loeschcke, Anita
Jaeger, Karl‐Erich
Thies, Stephan
author_sort Molitor, Rebecka
collection PubMed
description Hydrolases acting on polyesters like cutin, polycaprolactone or polyethylene terephthalate (PET) are of interest for several biotechnological applications like waste treatment, biocatalysis and sustainable polymer modifications. Recent studies suggest that a large variety of such enzymes are still to be identified and explored in a variety of microorganisms, including bacteria of the genus Pseudomonas. For activity‐based screening, methods have been established using agar plates which contain nanoparticles of polycaprolactone or PET prepared by solvent precipitation and evaporation. In this protocol article, we describe a straightforward agar plate‐based method using emulsifiable artificial polyesters as substrates, namely Impranil(®) DLN and liquid polycaprolactone diol (PLD). Thereby, the currently quite narrow set of screening substrates is expanded. We also suggest optional pre‐screening with short‐chain and middle‐chain‐length triglycerides as substrates to identify enzymes with lipolytic activity to be further tested for polyesterase activity. We applied these assays to experimentally demonstrate polyesterase activity in bacteria from the P. pertucinogena lineage originating from contaminated soils and diverse marine habitats.
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spelling pubmed-69225262019-12-30 Agar plate‐based screening methods for the identification of polyester hydrolysis by Pseudomonas species Molitor, Rebecka Bollinger, Alexander Kubicki, Sonja Loeschcke, Anita Jaeger, Karl‐Erich Thies, Stephan Microb Biotechnol Brief Reports Hydrolases acting on polyesters like cutin, polycaprolactone or polyethylene terephthalate (PET) are of interest for several biotechnological applications like waste treatment, biocatalysis and sustainable polymer modifications. Recent studies suggest that a large variety of such enzymes are still to be identified and explored in a variety of microorganisms, including bacteria of the genus Pseudomonas. For activity‐based screening, methods have been established using agar plates which contain nanoparticles of polycaprolactone or PET prepared by solvent precipitation and evaporation. In this protocol article, we describe a straightforward agar plate‐based method using emulsifiable artificial polyesters as substrates, namely Impranil(®) DLN and liquid polycaprolactone diol (PLD). Thereby, the currently quite narrow set of screening substrates is expanded. We also suggest optional pre‐screening with short‐chain and middle‐chain‐length triglycerides as substrates to identify enzymes with lipolytic activity to be further tested for polyesterase activity. We applied these assays to experimentally demonstrate polyesterase activity in bacteria from the P. pertucinogena lineage originating from contaminated soils and diverse marine habitats. John Wiley and Sons Inc. 2019-04-23 /pmc/articles/PMC6922526/ /pubmed/31016871 http://dx.doi.org/10.1111/1751-7915.13418 Text en © 2019 The Authors. Microbial Biotechnology published by John Wiley & Sons Ltd and Society for Applied Microbiology. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Brief Reports
Molitor, Rebecka
Bollinger, Alexander
Kubicki, Sonja
Loeschcke, Anita
Jaeger, Karl‐Erich
Thies, Stephan
Agar plate‐based screening methods for the identification of polyester hydrolysis by Pseudomonas species
title Agar plate‐based screening methods for the identification of polyester hydrolysis by Pseudomonas species
title_full Agar plate‐based screening methods for the identification of polyester hydrolysis by Pseudomonas species
title_fullStr Agar plate‐based screening methods for the identification of polyester hydrolysis by Pseudomonas species
title_full_unstemmed Agar plate‐based screening methods for the identification of polyester hydrolysis by Pseudomonas species
title_short Agar plate‐based screening methods for the identification of polyester hydrolysis by Pseudomonas species
title_sort agar plate‐based screening methods for the identification of polyester hydrolysis by pseudomonas species
topic Brief Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6922526/
https://www.ncbi.nlm.nih.gov/pubmed/31016871
http://dx.doi.org/10.1111/1751-7915.13418
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