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Agar plate‐based screening methods for the identification of polyester hydrolysis by Pseudomonas species
Hydrolases acting on polyesters like cutin, polycaprolactone or polyethylene terephthalate (PET) are of interest for several biotechnological applications like waste treatment, biocatalysis and sustainable polymer modifications. Recent studies suggest that a large variety of such enzymes are still t...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6922526/ https://www.ncbi.nlm.nih.gov/pubmed/31016871 http://dx.doi.org/10.1111/1751-7915.13418 |
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author | Molitor, Rebecka Bollinger, Alexander Kubicki, Sonja Loeschcke, Anita Jaeger, Karl‐Erich Thies, Stephan |
author_facet | Molitor, Rebecka Bollinger, Alexander Kubicki, Sonja Loeschcke, Anita Jaeger, Karl‐Erich Thies, Stephan |
author_sort | Molitor, Rebecka |
collection | PubMed |
description | Hydrolases acting on polyesters like cutin, polycaprolactone or polyethylene terephthalate (PET) are of interest for several biotechnological applications like waste treatment, biocatalysis and sustainable polymer modifications. Recent studies suggest that a large variety of such enzymes are still to be identified and explored in a variety of microorganisms, including bacteria of the genus Pseudomonas. For activity‐based screening, methods have been established using agar plates which contain nanoparticles of polycaprolactone or PET prepared by solvent precipitation and evaporation. In this protocol article, we describe a straightforward agar plate‐based method using emulsifiable artificial polyesters as substrates, namely Impranil(®) DLN and liquid polycaprolactone diol (PLD). Thereby, the currently quite narrow set of screening substrates is expanded. We also suggest optional pre‐screening with short‐chain and middle‐chain‐length triglycerides as substrates to identify enzymes with lipolytic activity to be further tested for polyesterase activity. We applied these assays to experimentally demonstrate polyesterase activity in bacteria from the P. pertucinogena lineage originating from contaminated soils and diverse marine habitats. |
format | Online Article Text |
id | pubmed-6922526 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-69225262019-12-30 Agar plate‐based screening methods for the identification of polyester hydrolysis by Pseudomonas species Molitor, Rebecka Bollinger, Alexander Kubicki, Sonja Loeschcke, Anita Jaeger, Karl‐Erich Thies, Stephan Microb Biotechnol Brief Reports Hydrolases acting on polyesters like cutin, polycaprolactone or polyethylene terephthalate (PET) are of interest for several biotechnological applications like waste treatment, biocatalysis and sustainable polymer modifications. Recent studies suggest that a large variety of such enzymes are still to be identified and explored in a variety of microorganisms, including bacteria of the genus Pseudomonas. For activity‐based screening, methods have been established using agar plates which contain nanoparticles of polycaprolactone or PET prepared by solvent precipitation and evaporation. In this protocol article, we describe a straightforward agar plate‐based method using emulsifiable artificial polyesters as substrates, namely Impranil(®) DLN and liquid polycaprolactone diol (PLD). Thereby, the currently quite narrow set of screening substrates is expanded. We also suggest optional pre‐screening with short‐chain and middle‐chain‐length triglycerides as substrates to identify enzymes with lipolytic activity to be further tested for polyesterase activity. We applied these assays to experimentally demonstrate polyesterase activity in bacteria from the P. pertucinogena lineage originating from contaminated soils and diverse marine habitats. John Wiley and Sons Inc. 2019-04-23 /pmc/articles/PMC6922526/ /pubmed/31016871 http://dx.doi.org/10.1111/1751-7915.13418 Text en © 2019 The Authors. Microbial Biotechnology published by John Wiley & Sons Ltd and Society for Applied Microbiology. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Brief Reports Molitor, Rebecka Bollinger, Alexander Kubicki, Sonja Loeschcke, Anita Jaeger, Karl‐Erich Thies, Stephan Agar plate‐based screening methods for the identification of polyester hydrolysis by Pseudomonas species |
title | Agar plate‐based screening methods for the identification of polyester hydrolysis by Pseudomonas species |
title_full | Agar plate‐based screening methods for the identification of polyester hydrolysis by Pseudomonas species |
title_fullStr | Agar plate‐based screening methods for the identification of polyester hydrolysis by Pseudomonas species |
title_full_unstemmed | Agar plate‐based screening methods for the identification of polyester hydrolysis by Pseudomonas species |
title_short | Agar plate‐based screening methods for the identification of polyester hydrolysis by Pseudomonas species |
title_sort | agar plate‐based screening methods for the identification of polyester hydrolysis by pseudomonas species |
topic | Brief Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6922526/ https://www.ncbi.nlm.nih.gov/pubmed/31016871 http://dx.doi.org/10.1111/1751-7915.13418 |
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