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m6A RNA methylation regulators can contribute to malignant progression and impact the prognosis of bladder cancer

N6-methyladenosine (m6A) is the most common form of messenger RNA (mRNA) modification. An increasing number of studies have proven that m6A RNA methylation regulators are overexpressed in many cancers and participate in the development of cancer through the dynamic regulation of m6A RNA methylation...

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Autores principales: Chen, Mei, Nie, Zhen-yu, Wen, Xiao-hong, Gao, Yuan-hui, Cao, Hui, Zhang, Shu-fang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Portland Press Ltd. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6923333/
https://www.ncbi.nlm.nih.gov/pubmed/31808521
http://dx.doi.org/10.1042/BSR20192892
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author Chen, Mei
Nie, Zhen-yu
Wen, Xiao-hong
Gao, Yuan-hui
Cao, Hui
Zhang, Shu-fang
author_facet Chen, Mei
Nie, Zhen-yu
Wen, Xiao-hong
Gao, Yuan-hui
Cao, Hui
Zhang, Shu-fang
author_sort Chen, Mei
collection PubMed
description N6-methyladenosine (m6A) is the most common form of messenger RNA (mRNA) modification. An increasing number of studies have proven that m6A RNA methylation regulators are overexpressed in many cancers and participate in the development of cancer through the dynamic regulation of m6A RNA methylation regulators. However, the prognostic role of m6A RNA methylation regulators in bladder cancer (BC) is poorly understood. In the present study, we downloaded the mRNA expression data from The Cancer Genome Atlas (TCGA) database and the corresponding clinical and prognostic information. The relationship between m6A RNA methylation regulators and clinicopathological variables of BC patients was assessed by the Kolmogorov–Smirnov test. The expression of the m6A RNA methylation regulators was differentially associated with different clinicopathological variables of BC patients. The least absolute shrinkage and selection operator (LASSO) Cox regression model was then applied to identify three m6A RNA methylation regulators. The risk signature was constructed as follows: 0.164FTO − (0.081YTHDC1+0.032WTAP). Based on the risk signature, the risk score of each patient was calculated, and the patients were divided into a high-risk group and a low-risk group. The overall survival (OS) rate of the high-risk group was significantly lower than that of the low-risk group. The risk signature was not only an independent prognostic marker for BC patients but also a predictor of clinicopathological variables. In conclusion, m6A RNA methylation regulators can participate in the malignant progression of BC, and a risk signature with three selected m6A RNA methylation regulators may be a promising prognostic biomarker to guide personalized treatment for BC patients.
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spelling pubmed-69233332019-12-31 m6A RNA methylation regulators can contribute to malignant progression and impact the prognosis of bladder cancer Chen, Mei Nie, Zhen-yu Wen, Xiao-hong Gao, Yuan-hui Cao, Hui Zhang, Shu-fang Biosci Rep Bioinformatics N6-methyladenosine (m6A) is the most common form of messenger RNA (mRNA) modification. An increasing number of studies have proven that m6A RNA methylation regulators are overexpressed in many cancers and participate in the development of cancer through the dynamic regulation of m6A RNA methylation regulators. However, the prognostic role of m6A RNA methylation regulators in bladder cancer (BC) is poorly understood. In the present study, we downloaded the mRNA expression data from The Cancer Genome Atlas (TCGA) database and the corresponding clinical and prognostic information. The relationship between m6A RNA methylation regulators and clinicopathological variables of BC patients was assessed by the Kolmogorov–Smirnov test. The expression of the m6A RNA methylation regulators was differentially associated with different clinicopathological variables of BC patients. The least absolute shrinkage and selection operator (LASSO) Cox regression model was then applied to identify three m6A RNA methylation regulators. The risk signature was constructed as follows: 0.164FTO − (0.081YTHDC1+0.032WTAP). Based on the risk signature, the risk score of each patient was calculated, and the patients were divided into a high-risk group and a low-risk group. The overall survival (OS) rate of the high-risk group was significantly lower than that of the low-risk group. The risk signature was not only an independent prognostic marker for BC patients but also a predictor of clinicopathological variables. In conclusion, m6A RNA methylation regulators can participate in the malignant progression of BC, and a risk signature with three selected m6A RNA methylation regulators may be a promising prognostic biomarker to guide personalized treatment for BC patients. Portland Press Ltd. 2019-12-20 /pmc/articles/PMC6923333/ /pubmed/31808521 http://dx.doi.org/10.1042/BSR20192892 Text en © 2019 The Author(s). https://creativecommons.org/licenses/by/4.0/ This is an open access article published by Portland Press Limited on behalf of the Biochemical Society and distributed under the Creative Commons Attribution License 4.0 (CC BY).
spellingShingle Bioinformatics
Chen, Mei
Nie, Zhen-yu
Wen, Xiao-hong
Gao, Yuan-hui
Cao, Hui
Zhang, Shu-fang
m6A RNA methylation regulators can contribute to malignant progression and impact the prognosis of bladder cancer
title m6A RNA methylation regulators can contribute to malignant progression and impact the prognosis of bladder cancer
title_full m6A RNA methylation regulators can contribute to malignant progression and impact the prognosis of bladder cancer
title_fullStr m6A RNA methylation regulators can contribute to malignant progression and impact the prognosis of bladder cancer
title_full_unstemmed m6A RNA methylation regulators can contribute to malignant progression and impact the prognosis of bladder cancer
title_short m6A RNA methylation regulators can contribute to malignant progression and impact the prognosis of bladder cancer
title_sort m6a rna methylation regulators can contribute to malignant progression and impact the prognosis of bladder cancer
topic Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6923333/
https://www.ncbi.nlm.nih.gov/pubmed/31808521
http://dx.doi.org/10.1042/BSR20192892
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