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Improving clinical named entity recognition in Chinese using the graphical and phonetic feature

BACKGROUND: Clinical Named Entity Recognition is to find the name of diseases, body parts and other related terms from the given text. Because Chinese language is quite different with English language, the machine cannot simply get the graphical and phonetic information form Chinese characters. The...

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Detalles Bibliográficos
Autores principales: Wang, Yifei, Ananiadou, Sophia, Tsujii, Jun’ichi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6927114/
https://www.ncbi.nlm.nih.gov/pubmed/31865903
http://dx.doi.org/10.1186/s12911-019-0980-z
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author Wang, Yifei
Ananiadou, Sophia
Tsujii, Jun’ichi
author_facet Wang, Yifei
Ananiadou, Sophia
Tsujii, Jun’ichi
author_sort Wang, Yifei
collection PubMed
description BACKGROUND: Clinical Named Entity Recognition is to find the name of diseases, body parts and other related terms from the given text. Because Chinese language is quite different with English language, the machine cannot simply get the graphical and phonetic information form Chinese characters. The method for Chinese should be different from that for English. Chinese characters present abundant information with the graphical features, recent research on Chinese word embedding tries to use graphical information as subword. This paper uses both graphical and phonetic features to improve Chinese Clinical Named Entity Recognition based on the presence of phono-semantic characters. METHODS: This paper proposed three different embedding models and tested them on the annotated data. The data have been divided into two sections for exploring the effect of the proportion of phono-semantic characters. RESULTS: The model using primary radical and pinyin can improve Clinical Named Entity Recognition in Chinese and get the F-measure of 0.712. More phono-semantic characters does not give a better result. CONCLUSIONS: The paper proves that the use of the combination of graphical and phonetic features can improve the Clinical Named Entity Recognition in Chinese.
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spelling pubmed-69271142019-12-30 Improving clinical named entity recognition in Chinese using the graphical and phonetic feature Wang, Yifei Ananiadou, Sophia Tsujii, Jun’ichi BMC Med Inform Decis Mak Research BACKGROUND: Clinical Named Entity Recognition is to find the name of diseases, body parts and other related terms from the given text. Because Chinese language is quite different with English language, the machine cannot simply get the graphical and phonetic information form Chinese characters. The method for Chinese should be different from that for English. Chinese characters present abundant information with the graphical features, recent research on Chinese word embedding tries to use graphical information as subword. This paper uses both graphical and phonetic features to improve Chinese Clinical Named Entity Recognition based on the presence of phono-semantic characters. METHODS: This paper proposed three different embedding models and tested them on the annotated data. The data have been divided into two sections for exploring the effect of the proportion of phono-semantic characters. RESULTS: The model using primary radical and pinyin can improve Clinical Named Entity Recognition in Chinese and get the F-measure of 0.712. More phono-semantic characters does not give a better result. CONCLUSIONS: The paper proves that the use of the combination of graphical and phonetic features can improve the Clinical Named Entity Recognition in Chinese. BioMed Central 2019-12-23 /pmc/articles/PMC6927114/ /pubmed/31865903 http://dx.doi.org/10.1186/s12911-019-0980-z Text en © The Author(s) 2019 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Wang, Yifei
Ananiadou, Sophia
Tsujii, Jun’ichi
Improving clinical named entity recognition in Chinese using the graphical and phonetic feature
title Improving clinical named entity recognition in Chinese using the graphical and phonetic feature
title_full Improving clinical named entity recognition in Chinese using the graphical and phonetic feature
title_fullStr Improving clinical named entity recognition in Chinese using the graphical and phonetic feature
title_full_unstemmed Improving clinical named entity recognition in Chinese using the graphical and phonetic feature
title_short Improving clinical named entity recognition in Chinese using the graphical and phonetic feature
title_sort improving clinical named entity recognition in chinese using the graphical and phonetic feature
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6927114/
https://www.ncbi.nlm.nih.gov/pubmed/31865903
http://dx.doi.org/10.1186/s12911-019-0980-z
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