Cargando…

Systematical study of the mechanistic factors regulating genome dynamics in vivo by CRISPRsie

Detalles Bibliográficos
Autores principales:	Han, Deqiang, Hong, Yu, Mai, Xueying, Hu, Qingtao, Lu, Guangqing, Duan, Jinzhi, Xu, Jingru, Si, Xiaofang, Zhang, Yu
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2019
Materias:	Application Note
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6927321/ https://www.ncbi.nlm.nih.gov/pubmed/31330540 http://dx.doi.org/10.1093/jmcb/mjz074

Ejemplares similares

Live imaging and tracking of genome regions in CRISPR/dCas9 knock-in mice
por: Duan, Jinzhi, et al.
Publicado: (2018)

CausalR: extracting mechanistic sense from genome scale data
por: Bradley, Glyn, et al.
Publicado: (2017)

Multimodal mechanistic signatures for neurodegenerative diseases (NeuroMMSig): a web server for mechanism enrichment
por: Domingo-Fernández, Daniel, et al.
Publicado: (2017)

DysRegSig: an R package for identifying gene dysregulations and building mechanistic signatures in cancer
por: Li, Quanxue, et al.
Publicado: (2020)

RGAAT: A Reference-based Genome Assembly and Annotation Tool for New Genomes and Upgrade of Known Genomes
por: Liu, Wanfei, et al.
Publicado: (2018)

FancyGene: dynamic visualization of gene structures and protein domain architectures on genomic loci
por: Rambaldi, Davide, et al.
Publicado: (2009)

Dynamix: dynamic visualization by automatic selection of informative tracks from hundreds of genomic datasets
por: Monfort, Matthias, et al.
Publicado: (2017)

PHi-C2: interpreting Hi-C data as the dynamic 3D genome state
por: Shinkai, Soya, et al.
Publicado: (2022)

PGAP: pan-genomes analysis pipeline
por: Zhao, Yongbing, et al.
Publicado: (2012)

SCSsim: an integrated tool for simulating single-cell genome sequencing data
por: Yu, Zhenhua, et al.
Publicado: (2020)

KGCAK: a K-mer based database for genome-wide phylogeny and complexity evaluation
por: Wang, Dapeng, et al.
Publicado: (2015)

shinyChromosome: An R/Shiny Application for Interactive Creation of Non-circular Plots of Whole Genomes
por: Yu, Yiming, et al.
Publicado: (2019)

PanGP: A tool for quickly analyzing bacterial pan-genome profile
por: Zhao, Yongbing, et al.
Publicado: (2014)

CROSSalive: a web server for predicting the in vivo structure of RNA molecules
por: Ponti, Riccardo Delli, et al.
Publicado: (2019)

ZooPathWeb: a comprehensive web resource for zoonotic pathogens
por: Hu, Rui-Si, et al.
Publicado: (2023)

NGenomeSyn: an easy-to-use and flexible tool for publication-ready visualization of syntenic relationships across multiple genomes
por: He, Weiming, et al.
Publicado: (2023)

EDEN: evolutionary dynamics within environments
por: Münch, Philipp C, et al.
Publicado: (2017)

The Encyclopedia of Proteome Dynamics: the KinoViewer
por: Brenes, Alejandro, et al.
Publicado: (2019)

HiCube: interactive visualization of multiscale and multimodal Hi-C and 3D genome data
por: Ye, Tiantian, et al.
Publicado: (2023)

pyGenomeTracks: reproducible plots for multivariate genomic datasets
por: Lopez-Delisle, Lucille, et al.
Publicado: (2020)

SASpector: analysis of missing genomic regions in draft genomes of prokaryotes
por: Lood, Cédric, et al.
Publicado: (2022)

Efficient implementation of convolutional neural networks in the data processing of two-photon in vivo imaging
por: Wang, Yangzhen, et al.
Publicado: (2019)

TRIPBASE: a database for identifying the human genomic DNA and lncRNA triplexes
por: Lin, Tzu-Chieh, et al.
Publicado: (2023)

SPREAD: spatial phylogenetic reconstruction of evolutionary dynamics
por: Bielejec, Filip, et al.
Publicado: (2011)

Epock: rapid analysis of protein pocket dynamics
por: Laurent, Benoist, et al.
Publicado: (2015)

EcoPLOT: dynamic analysis of biogeochemical data
por: Sanchez, Christopher D, et al.
Publicado: (2021)

Roundup 2.0: enabling comparative genomics for over 1800 genomes
por: DeLuca, Todd F., et al.
Publicado: (2012)

Navigating protected genomics data with UCSC Genome Browser in a Box
por: Haeussler, Maximilian, et al.
Publicado: (2015)

myGenomeBrowser: building and sharing your own genome browser
por: Carrere, Sébastien, et al.
Publicado: (2017)

GTDB-Tk: a toolkit to classify genomes with the Genome Taxonomy Database
por: Chaumeil, Pierre-Alain, et al.
Publicado: (2020)

The Integrated Genome Browser: free software for distribution and exploration of genome-scale datasets
por: Nicol, John W., et al.
Publicado: (2009)

DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication
por: Tanizawa, Yasuhiro, et al.
Publicado: (2018)

Genome Context Viewer: visual exploration of multiple annotated genomes using microsynteny
por: Cleary, Alan, et al.
Publicado: (2017)

Sequanix: a dynamic graphical interface for Snakemake workflows
por: Desvillechabrol, Dimitri, et al.
Publicado: (2018)

Simulating the dynamics of targeted capture sequencing with CapSim
por: Cao, Minh Duc, et al.
Publicado: (2018)

Measurement of dynamic membrane mechanosensation using optical tweezers
por: Li, Xuanling, et al.
Publicado: (2021)

FRETraj: integrating single-molecule spectroscopy with molecular dynamics
por: Steffen, Fabio D, et al.
Publicado: (2021)

dRFEtools: dynamic recursive feature elimination for omics
por: Benjamin, Kynon J M, et al.
Publicado: (2023)

PGPointNovo: an efficient neural network-based tool for parallel de novo peptide sequencing
por: Xu, Xiaofang, et al.
Publicado: (2023)

Genome Detective Coronavirus Typing Tool for rapid identification and characterization of novel coronavirus genomes
por: Cleemput, Sara, et al.
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_2264081lu4rpqndmfubsan4n95