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Genetic links between endometriosis and cancers in women
Endometriosis is a chronic disease occurring during the reproductive stage of women. Although there is only limited association between endometriosis and gynecological cancers with regard to clinical features, the molecular basis of the relationship between these diseases is unexplored. We conducted...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6927350/ https://www.ncbi.nlm.nih.gov/pubmed/31879572 http://dx.doi.org/10.7717/peerj.8135 |
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author | Bhyan, Salma Begum Zhao, Li Wee, YongKiat Liu, Yining Zhao, Min |
author_facet | Bhyan, Salma Begum Zhao, Li Wee, YongKiat Liu, Yining Zhao, Min |
author_sort | Bhyan, Salma Begum |
collection | PubMed |
description | Endometriosis is a chronic disease occurring during the reproductive stage of women. Although there is only limited association between endometriosis and gynecological cancers with regard to clinical features, the molecular basis of the relationship between these diseases is unexplored. We conducted a systematic study by integrating literature-based evidence, gene expression and large-scale cancer genomics data in order to reveal any genetic relationships between endometriosis and cancers in women. We curated 984 endometriosis-related genes from 3270 PubMed articles and then conducted a meta-analysis of the two public gene expression profiles related to endometriosis which identified Differential Expression of Genes (DEGs). Following an overlapping analysis, we identified 39 key endometriosis-related genes common in both literature and DEG analysis. Finally, the functional analysis confirmed that all the 39 genes were associated with the vital processes of tumour formation and cancer progression and that two genes (PGR and ESR1) were common to four cancers of women. From network analysis, we identified a novel linker gene, C3AR1, which had not been implicated previously in endometriosis. The shared genetic mechanisms of endometriosis and cancers in women identified in this study provided possible new avenues of multiple disease management and treatments through early diagnosis. |
format | Online Article Text |
id | pubmed-6927350 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-69273502019-12-26 Genetic links between endometriosis and cancers in women Bhyan, Salma Begum Zhao, Li Wee, YongKiat Liu, Yining Zhao, Min PeerJ Bioinformatics Endometriosis is a chronic disease occurring during the reproductive stage of women. Although there is only limited association between endometriosis and gynecological cancers with regard to clinical features, the molecular basis of the relationship between these diseases is unexplored. We conducted a systematic study by integrating literature-based evidence, gene expression and large-scale cancer genomics data in order to reveal any genetic relationships between endometriosis and cancers in women. We curated 984 endometriosis-related genes from 3270 PubMed articles and then conducted a meta-analysis of the two public gene expression profiles related to endometriosis which identified Differential Expression of Genes (DEGs). Following an overlapping analysis, we identified 39 key endometriosis-related genes common in both literature and DEG analysis. Finally, the functional analysis confirmed that all the 39 genes were associated with the vital processes of tumour formation and cancer progression and that two genes (PGR and ESR1) were common to four cancers of women. From network analysis, we identified a novel linker gene, C3AR1, which had not been implicated previously in endometriosis. The shared genetic mechanisms of endometriosis and cancers in women identified in this study provided possible new avenues of multiple disease management and treatments through early diagnosis. PeerJ Inc. 2019-12-20 /pmc/articles/PMC6927350/ /pubmed/31879572 http://dx.doi.org/10.7717/peerj.8135 Text en ©2019 Bhyan et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Bioinformatics Bhyan, Salma Begum Zhao, Li Wee, YongKiat Liu, Yining Zhao, Min Genetic links between endometriosis and cancers in women |
title | Genetic links between endometriosis and cancers in women |
title_full | Genetic links between endometriosis and cancers in women |
title_fullStr | Genetic links between endometriosis and cancers in women |
title_full_unstemmed | Genetic links between endometriosis and cancers in women |
title_short | Genetic links between endometriosis and cancers in women |
title_sort | genetic links between endometriosis and cancers in women |
topic | Bioinformatics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6927350/ https://www.ncbi.nlm.nih.gov/pubmed/31879572 http://dx.doi.org/10.7717/peerj.8135 |
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