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Integrative analysis of shared genetic pathogenesis by autism spectrum disorder and obsessive-compulsive disorder
Many common pathological features have been observed for both autism spectrum disorders (ASDs) and obsessive-compulsive disorder (OCD). However, no systematic analysis of the common gene markers associated with both ASD and OCD has been conducted so far. Here, two batches of large-scale literature-b...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Portland Press Ltd.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6928520/ https://www.ncbi.nlm.nih.gov/pubmed/31808517 http://dx.doi.org/10.1042/BSR20191942 |
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author | Liu, Dongbai Cao, Hongbao Kural, Kamil Can Fang, Qi Zhang, Fuquan |
author_facet | Liu, Dongbai Cao, Hongbao Kural, Kamil Can Fang, Qi Zhang, Fuquan |
author_sort | Liu, Dongbai |
collection | PubMed |
description | Many common pathological features have been observed for both autism spectrum disorders (ASDs) and obsessive-compulsive disorder (OCD). However, no systematic analysis of the common gene markers associated with both ASD and OCD has been conducted so far. Here, two batches of large-scale literature-based disease–gene relation data (updated in 2017 and 2019, respectively) and gene expression data were integrated to study the possible association between OCD and ASD at the genetic level. Genes linked to OCD and ASD present significant overlap (P-value <2.64e-39). A genetic network of over 20 genes was constructed, through which OCD and ASD may exert influence on each other. The 2017-based analysis suggested six potential common risk genes for OCD and ASD (CDH2, ADCY8, APOE, TSPO, TOR1A, and OLIG2), and the 2019-based study identified two more genes (DISP1 and SETD1A). Notably, the gene APOE identified by the 2017-based analysis has been implicated to have an association with ASD in a recent study (2018) with DNA methylation analysis. Our results support the possible complex genetic associations between OCD and ASD. Genes linked to one disease are worth further investigation as potential risk factors for the other. |
format | Online Article Text |
id | pubmed-6928520 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Portland Press Ltd. |
record_format | MEDLINE/PubMed |
spelling | pubmed-69285202020-01-02 Integrative analysis of shared genetic pathogenesis by autism spectrum disorder and obsessive-compulsive disorder Liu, Dongbai Cao, Hongbao Kural, Kamil Can Fang, Qi Zhang, Fuquan Biosci Rep Bioinformatics Many common pathological features have been observed for both autism spectrum disorders (ASDs) and obsessive-compulsive disorder (OCD). However, no systematic analysis of the common gene markers associated with both ASD and OCD has been conducted so far. Here, two batches of large-scale literature-based disease–gene relation data (updated in 2017 and 2019, respectively) and gene expression data were integrated to study the possible association between OCD and ASD at the genetic level. Genes linked to OCD and ASD present significant overlap (P-value <2.64e-39). A genetic network of over 20 genes was constructed, through which OCD and ASD may exert influence on each other. The 2017-based analysis suggested six potential common risk genes for OCD and ASD (CDH2, ADCY8, APOE, TSPO, TOR1A, and OLIG2), and the 2019-based study identified two more genes (DISP1 and SETD1A). Notably, the gene APOE identified by the 2017-based analysis has been implicated to have an association with ASD in a recent study (2018) with DNA methylation analysis. Our results support the possible complex genetic associations between OCD and ASD. Genes linked to one disease are worth further investigation as potential risk factors for the other. Portland Press Ltd. 2019-12-23 /pmc/articles/PMC6928520/ /pubmed/31808517 http://dx.doi.org/10.1042/BSR20191942 Text en © 2019 The Author(s). https://creativecommons.org/licenses/by/4.0/ This is an open access article published by Portland Press Limited on behalf of the Biochemical Society and distributed under the Creative Commons Attribution License 4.0 (CC BY). |
spellingShingle | Bioinformatics Liu, Dongbai Cao, Hongbao Kural, Kamil Can Fang, Qi Zhang, Fuquan Integrative analysis of shared genetic pathogenesis by autism spectrum disorder and obsessive-compulsive disorder |
title | Integrative analysis of shared genetic pathogenesis by autism spectrum disorder and obsessive-compulsive disorder |
title_full | Integrative analysis of shared genetic pathogenesis by autism spectrum disorder and obsessive-compulsive disorder |
title_fullStr | Integrative analysis of shared genetic pathogenesis by autism spectrum disorder and obsessive-compulsive disorder |
title_full_unstemmed | Integrative analysis of shared genetic pathogenesis by autism spectrum disorder and obsessive-compulsive disorder |
title_short | Integrative analysis of shared genetic pathogenesis by autism spectrum disorder and obsessive-compulsive disorder |
title_sort | integrative analysis of shared genetic pathogenesis by autism spectrum disorder and obsessive-compulsive disorder |
topic | Bioinformatics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6928520/ https://www.ncbi.nlm.nih.gov/pubmed/31808517 http://dx.doi.org/10.1042/BSR20191942 |
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