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Integrative analysis of shared genetic pathogenesis by autism spectrum disorder and obsessive-compulsive disorder

Many common pathological features have been observed for both autism spectrum disorders (ASDs) and obsessive-compulsive disorder (OCD). However, no systematic analysis of the common gene markers associated with both ASD and OCD has been conducted so far. Here, two batches of large-scale literature-b...

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Autores principales: Liu, Dongbai, Cao, Hongbao, Kural, Kamil Can, Fang, Qi, Zhang, Fuquan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Portland Press Ltd. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6928520/
https://www.ncbi.nlm.nih.gov/pubmed/31808517
http://dx.doi.org/10.1042/BSR20191942
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author Liu, Dongbai
Cao, Hongbao
Kural, Kamil Can
Fang, Qi
Zhang, Fuquan
author_facet Liu, Dongbai
Cao, Hongbao
Kural, Kamil Can
Fang, Qi
Zhang, Fuquan
author_sort Liu, Dongbai
collection PubMed
description Many common pathological features have been observed for both autism spectrum disorders (ASDs) and obsessive-compulsive disorder (OCD). However, no systematic analysis of the common gene markers associated with both ASD and OCD has been conducted so far. Here, two batches of large-scale literature-based disease–gene relation data (updated in 2017 and 2019, respectively) and gene expression data were integrated to study the possible association between OCD and ASD at the genetic level. Genes linked to OCD and ASD present significant overlap (P-value <2.64e-39). A genetic network of over 20 genes was constructed, through which OCD and ASD may exert influence on each other. The 2017-based analysis suggested six potential common risk genes for OCD and ASD (CDH2, ADCY8, APOE, TSPO, TOR1A, and OLIG2), and the 2019-based study identified two more genes (DISP1 and SETD1A). Notably, the gene APOE identified by the 2017-based analysis has been implicated to have an association with ASD in a recent study (2018) with DNA methylation analysis. Our results support the possible complex genetic associations between OCD and ASD. Genes linked to one disease are worth further investigation as potential risk factors for the other.
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spelling pubmed-69285202020-01-02 Integrative analysis of shared genetic pathogenesis by autism spectrum disorder and obsessive-compulsive disorder Liu, Dongbai Cao, Hongbao Kural, Kamil Can Fang, Qi Zhang, Fuquan Biosci Rep Bioinformatics Many common pathological features have been observed for both autism spectrum disorders (ASDs) and obsessive-compulsive disorder (OCD). However, no systematic analysis of the common gene markers associated with both ASD and OCD has been conducted so far. Here, two batches of large-scale literature-based disease–gene relation data (updated in 2017 and 2019, respectively) and gene expression data were integrated to study the possible association between OCD and ASD at the genetic level. Genes linked to OCD and ASD present significant overlap (P-value <2.64e-39). A genetic network of over 20 genes was constructed, through which OCD and ASD may exert influence on each other. The 2017-based analysis suggested six potential common risk genes for OCD and ASD (CDH2, ADCY8, APOE, TSPO, TOR1A, and OLIG2), and the 2019-based study identified two more genes (DISP1 and SETD1A). Notably, the gene APOE identified by the 2017-based analysis has been implicated to have an association with ASD in a recent study (2018) with DNA methylation analysis. Our results support the possible complex genetic associations between OCD and ASD. Genes linked to one disease are worth further investigation as potential risk factors for the other. Portland Press Ltd. 2019-12-23 /pmc/articles/PMC6928520/ /pubmed/31808517 http://dx.doi.org/10.1042/BSR20191942 Text en © 2019 The Author(s). https://creativecommons.org/licenses/by/4.0/ This is an open access article published by Portland Press Limited on behalf of the Biochemical Society and distributed under the Creative Commons Attribution License 4.0 (CC BY).
spellingShingle Bioinformatics
Liu, Dongbai
Cao, Hongbao
Kural, Kamil Can
Fang, Qi
Zhang, Fuquan
Integrative analysis of shared genetic pathogenesis by autism spectrum disorder and obsessive-compulsive disorder
title Integrative analysis of shared genetic pathogenesis by autism spectrum disorder and obsessive-compulsive disorder
title_full Integrative analysis of shared genetic pathogenesis by autism spectrum disorder and obsessive-compulsive disorder
title_fullStr Integrative analysis of shared genetic pathogenesis by autism spectrum disorder and obsessive-compulsive disorder
title_full_unstemmed Integrative analysis of shared genetic pathogenesis by autism spectrum disorder and obsessive-compulsive disorder
title_short Integrative analysis of shared genetic pathogenesis by autism spectrum disorder and obsessive-compulsive disorder
title_sort integrative analysis of shared genetic pathogenesis by autism spectrum disorder and obsessive-compulsive disorder
topic Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6928520/
https://www.ncbi.nlm.nih.gov/pubmed/31808517
http://dx.doi.org/10.1042/BSR20191942
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