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Detecting Changes in the Caenorhabditis elegans Intestinal Environment Using an Engineered Bacterial Biosensor

[Image: see text] Caenorhabditis elegans has become a key model organism within biology. In particular, the transparent gut, rapid growing time, and ability to create a defined gut microbiota make it an ideal candidate organism for understanding and engineering the host microbiota. Here we present t...

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Autores principales: Rutter, Jack W., Ozdemir, Tanel, Galimov, Evgeniy R., Quintaneiro, Leonor M., Rosa, Luca, Thomas, Geraint M., Cabreiro, Filipe, Barnes, Chris P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2019
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6929061/
https://www.ncbi.nlm.nih.gov/pubmed/31657907
http://dx.doi.org/10.1021/acssynbio.9b00166
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author Rutter, Jack W.
Ozdemir, Tanel
Galimov, Evgeniy R.
Quintaneiro, Leonor M.
Rosa, Luca
Thomas, Geraint M.
Cabreiro, Filipe
Barnes, Chris P.
author_facet Rutter, Jack W.
Ozdemir, Tanel
Galimov, Evgeniy R.
Quintaneiro, Leonor M.
Rosa, Luca
Thomas, Geraint M.
Cabreiro, Filipe
Barnes, Chris P.
author_sort Rutter, Jack W.
collection PubMed
description [Image: see text] Caenorhabditis elegans has become a key model organism within biology. In particular, the transparent gut, rapid growing time, and ability to create a defined gut microbiota make it an ideal candidate organism for understanding and engineering the host microbiota. Here we present the development of an experimental model that can be used to characterize whole-cell bacterial biosensors in vivo. A dual-plasmid sensor system responding to isopropyl β-d-1-thiogalactopyranoside was developed and fully characterized in vitro. Subsequently, we show that the sensor was capable of detecting and reporting on changes in the intestinal environment of C. elegans after introducing an exogenous inducer into the environment. The protocols presented here may be used to aid the rational design of engineered bacterial circuits, primarily for diagnostic applications. In addition, the model system may serve to reduce the use of current animal models and aid in the exploration of complex questions within general nematode and host–microbe biology.
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spelling pubmed-69290612019-12-26 Detecting Changes in the Caenorhabditis elegans Intestinal Environment Using an Engineered Bacterial Biosensor Rutter, Jack W. Ozdemir, Tanel Galimov, Evgeniy R. Quintaneiro, Leonor M. Rosa, Luca Thomas, Geraint M. Cabreiro, Filipe Barnes, Chris P. ACS Synth Biol [Image: see text] Caenorhabditis elegans has become a key model organism within biology. In particular, the transparent gut, rapid growing time, and ability to create a defined gut microbiota make it an ideal candidate organism for understanding and engineering the host microbiota. Here we present the development of an experimental model that can be used to characterize whole-cell bacterial biosensors in vivo. A dual-plasmid sensor system responding to isopropyl β-d-1-thiogalactopyranoside was developed and fully characterized in vitro. Subsequently, we show that the sensor was capable of detecting and reporting on changes in the intestinal environment of C. elegans after introducing an exogenous inducer into the environment. The protocols presented here may be used to aid the rational design of engineered bacterial circuits, primarily for diagnostic applications. In addition, the model system may serve to reduce the use of current animal models and aid in the exploration of complex questions within general nematode and host–microbe biology. American Chemical Society 2019-10-28 2019-12-20 /pmc/articles/PMC6929061/ /pubmed/31657907 http://dx.doi.org/10.1021/acssynbio.9b00166 Text en Copyright © 2019 American Chemical Society This is an open access article published under a Creative Commons Attribution (CC-BY) License (http://pubs.acs.org/page/policy/authorchoice_ccby_termsofuse.html) , which permits unrestricted use, distribution and reproduction in any medium, provided the author and source are cited.
spellingShingle Rutter, Jack W.
Ozdemir, Tanel
Galimov, Evgeniy R.
Quintaneiro, Leonor M.
Rosa, Luca
Thomas, Geraint M.
Cabreiro, Filipe
Barnes, Chris P.
Detecting Changes in the Caenorhabditis elegans Intestinal Environment Using an Engineered Bacterial Biosensor
title Detecting Changes in the Caenorhabditis elegans Intestinal Environment Using an Engineered Bacterial Biosensor
title_full Detecting Changes in the Caenorhabditis elegans Intestinal Environment Using an Engineered Bacterial Biosensor
title_fullStr Detecting Changes in the Caenorhabditis elegans Intestinal Environment Using an Engineered Bacterial Biosensor
title_full_unstemmed Detecting Changes in the Caenorhabditis elegans Intestinal Environment Using an Engineered Bacterial Biosensor
title_short Detecting Changes in the Caenorhabditis elegans Intestinal Environment Using an Engineered Bacterial Biosensor
title_sort detecting changes in the caenorhabditis elegans intestinal environment using an engineered bacterial biosensor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6929061/
https://www.ncbi.nlm.nih.gov/pubmed/31657907
http://dx.doi.org/10.1021/acssynbio.9b00166
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