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BIN1 rs744373 variant shows different association with Alzheimer’s disease in Caucasian and Asian populations

BACKGROUND: The association between BIN1 rs744373 variant and Alzheimer’s disease (AD) had been identified by genome-wide association studies (GWASs) as well as candidate gene studies in Caucasian populations. But in East Asian populations, both positive and negative results had been identified by a...

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Autores principales: Han, Zhifa, Wang, Tao, Tian, Rui, Zhou, Wenyang, Wang, Pingping, Ren, Peng, Zong, Jian, Hu, Yang, Jin, Shuilin, Jiang, Qinghua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6929404/
https://www.ncbi.nlm.nih.gov/pubmed/31874619
http://dx.doi.org/10.1186/s12859-019-3264-9
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author Han, Zhifa
Wang, Tao
Tian, Rui
Zhou, Wenyang
Wang, Pingping
Ren, Peng
Zong, Jian
Hu, Yang
Jin, Shuilin
Jiang, Qinghua
author_facet Han, Zhifa
Wang, Tao
Tian, Rui
Zhou, Wenyang
Wang, Pingping
Ren, Peng
Zong, Jian
Hu, Yang
Jin, Shuilin
Jiang, Qinghua
author_sort Han, Zhifa
collection PubMed
description BACKGROUND: The association between BIN1 rs744373 variant and Alzheimer’s disease (AD) had been identified by genome-wide association studies (GWASs) as well as candidate gene studies in Caucasian populations. But in East Asian populations, both positive and negative results had been identified by association studies. Considering the smaller sample sizes of the studies in East Asian, we believe that the results did not have enough statistical power. RESULTS: We conducted a meta-analysis with 71,168 samples (22,395 AD cases and 48,773 controls, from 37 studies of 19 articles). Based on the additive model, we observed significant genetic heterogeneities in pooled populations as well as Caucasians and East Asians. We identified a significant association between rs744373 polymorphism with AD in pooled populations (P = 5 × 10(− 07), odds ratio (OR) = 1.12, and 95% confidence interval (CI) 1.07–1.17) and in Caucasian populations (P = 3.38 × 10(− 08), OR = 1.16, 95% CI 1.10–1.22). But in the East Asian populations, the association was not identified (P = 0.393, OR = 1.057, and 95% CI 0.95–1.15). Besides, the regression analysis suggested no significant publication bias. The results for sensitivity analysis as well as meta-analysis under the dominant model and recessive model remained consistent, which demonstrated the reliability of our finding. CONCLUSIONS: The large-scale meta-analysis highlighted the significant association between rs744373 polymorphism and AD risk in Caucasian populations but not in the East Asian populations.
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spelling pubmed-69294042019-12-30 BIN1 rs744373 variant shows different association with Alzheimer’s disease in Caucasian and Asian populations Han, Zhifa Wang, Tao Tian, Rui Zhou, Wenyang Wang, Pingping Ren, Peng Zong, Jian Hu, Yang Jin, Shuilin Jiang, Qinghua BMC Bioinformatics Research BACKGROUND: The association between BIN1 rs744373 variant and Alzheimer’s disease (AD) had been identified by genome-wide association studies (GWASs) as well as candidate gene studies in Caucasian populations. But in East Asian populations, both positive and negative results had been identified by association studies. Considering the smaller sample sizes of the studies in East Asian, we believe that the results did not have enough statistical power. RESULTS: We conducted a meta-analysis with 71,168 samples (22,395 AD cases and 48,773 controls, from 37 studies of 19 articles). Based on the additive model, we observed significant genetic heterogeneities in pooled populations as well as Caucasians and East Asians. We identified a significant association between rs744373 polymorphism with AD in pooled populations (P = 5 × 10(− 07), odds ratio (OR) = 1.12, and 95% confidence interval (CI) 1.07–1.17) and in Caucasian populations (P = 3.38 × 10(− 08), OR = 1.16, 95% CI 1.10–1.22). But in the East Asian populations, the association was not identified (P = 0.393, OR = 1.057, and 95% CI 0.95–1.15). Besides, the regression analysis suggested no significant publication bias. The results for sensitivity analysis as well as meta-analysis under the dominant model and recessive model remained consistent, which demonstrated the reliability of our finding. CONCLUSIONS: The large-scale meta-analysis highlighted the significant association between rs744373 polymorphism and AD risk in Caucasian populations but not in the East Asian populations. BioMed Central 2019-12-24 /pmc/articles/PMC6929404/ /pubmed/31874619 http://dx.doi.org/10.1186/s12859-019-3264-9 Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Han, Zhifa
Wang, Tao
Tian, Rui
Zhou, Wenyang
Wang, Pingping
Ren, Peng
Zong, Jian
Hu, Yang
Jin, Shuilin
Jiang, Qinghua
BIN1 rs744373 variant shows different association with Alzheimer’s disease in Caucasian and Asian populations
title BIN1 rs744373 variant shows different association with Alzheimer’s disease in Caucasian and Asian populations
title_full BIN1 rs744373 variant shows different association with Alzheimer’s disease in Caucasian and Asian populations
title_fullStr BIN1 rs744373 variant shows different association with Alzheimer’s disease in Caucasian and Asian populations
title_full_unstemmed BIN1 rs744373 variant shows different association with Alzheimer’s disease in Caucasian and Asian populations
title_short BIN1 rs744373 variant shows different association with Alzheimer’s disease in Caucasian and Asian populations
title_sort bin1 rs744373 variant shows different association with alzheimer’s disease in caucasian and asian populations
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6929404/
https://www.ncbi.nlm.nih.gov/pubmed/31874619
http://dx.doi.org/10.1186/s12859-019-3264-9
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