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DNA barcoding evidence for the North American presence of alfalfa cyst nematode, Heterodera medicaginis

Specimens of Heterodera have been collected from alfalfa fields in Kearny County, Kansas & Carbon County, Montana. DNA barcoding with the COI mitochondrial gene indicate that the species is not Heterodera glycines, soybean cyst nematode, H. schachtii, sugar beet cyst nematode, or H. trifolii, cl...

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Autores principales: Powers, Thomas, Skantar, Andrea, Harris, Tim, Higgins, Rebecca, Mullin, Peter, Hafez, Saad, Handoo, Zafar, Todd, Tim, Powers, Kirsten
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Exeley Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6929643/
https://www.ncbi.nlm.nih.gov/pubmed/31088028
http://dx.doi.org/10.21307/jofnem-2019-016
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author Powers, Thomas
Skantar, Andrea
Harris, Tim
Higgins, Rebecca
Mullin, Peter
Hafez, Saad
Handoo, Zafar
Todd, Tim
Powers, Kirsten
author_facet Powers, Thomas
Skantar, Andrea
Harris, Tim
Higgins, Rebecca
Mullin, Peter
Hafez, Saad
Handoo, Zafar
Todd, Tim
Powers, Kirsten
author_sort Powers, Thomas
collection PubMed
description Specimens of Heterodera have been collected from alfalfa fields in Kearny County, Kansas & Carbon County, Montana. DNA barcoding with the COI mitochondrial gene indicate that the species is not Heterodera glycines, soybean cyst nematode, H. schachtii, sugar beet cyst nematode, or H. trifolii, clover cyst nematode. Maximum likelihood phylogenetic trees show that the alfalfa specimens form a sister clade most closely related to H. glycines, with a 4.7% mean pairwise sequence divergence across the 862 nucleotides of the COI marker. Morphological analyses of juveniles and cysts conform to the measurements of H. medicaginis, the alfalfa cyst nematode originally described from the USSR in 1971. Initial host testing demonstrated that the nematode reproduced on alfalfa, but not on soybeans, tomato, or corn. Collectively, the evidence suggests that this finding represents the first record of H. medicaginis in North America. Definitive confirmation of this diagnosis would require COI sequence of eastern European isolates of this species.
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spelling pubmed-69296432020-01-28 DNA barcoding evidence for the North American presence of alfalfa cyst nematode, Heterodera medicaginis Powers, Thomas Skantar, Andrea Harris, Tim Higgins, Rebecca Mullin, Peter Hafez, Saad Handoo, Zafar Todd, Tim Powers, Kirsten J Nematol Life Sciences Specimens of Heterodera have been collected from alfalfa fields in Kearny County, Kansas & Carbon County, Montana. DNA barcoding with the COI mitochondrial gene indicate that the species is not Heterodera glycines, soybean cyst nematode, H. schachtii, sugar beet cyst nematode, or H. trifolii, clover cyst nematode. Maximum likelihood phylogenetic trees show that the alfalfa specimens form a sister clade most closely related to H. glycines, with a 4.7% mean pairwise sequence divergence across the 862 nucleotides of the COI marker. Morphological analyses of juveniles and cysts conform to the measurements of H. medicaginis, the alfalfa cyst nematode originally described from the USSR in 1971. Initial host testing demonstrated that the nematode reproduced on alfalfa, but not on soybeans, tomato, or corn. Collectively, the evidence suggests that this finding represents the first record of H. medicaginis in North America. Definitive confirmation of this diagnosis would require COI sequence of eastern European isolates of this species. Exeley Inc. 2019-04-24 /pmc/articles/PMC6929643/ /pubmed/31088028 http://dx.doi.org/10.21307/jofnem-2019-016 Text en © 2019 Authors https://creativecommons.org/licenses/by/4.0/ https://creativecommons.org/licenses/by/4.0/This is an Open Access article licensed under the Creative Commons CC BY 4.0 license, https://creativecommons.org/licenses/by/4.0/
spellingShingle Life Sciences
Powers, Thomas
Skantar, Andrea
Harris, Tim
Higgins, Rebecca
Mullin, Peter
Hafez, Saad
Handoo, Zafar
Todd, Tim
Powers, Kirsten
DNA barcoding evidence for the North American presence of alfalfa cyst nematode, Heterodera medicaginis
title DNA barcoding evidence for the North American presence of alfalfa cyst nematode, Heterodera medicaginis
title_full DNA barcoding evidence for the North American presence of alfalfa cyst nematode, Heterodera medicaginis
title_fullStr DNA barcoding evidence for the North American presence of alfalfa cyst nematode, Heterodera medicaginis
title_full_unstemmed DNA barcoding evidence for the North American presence of alfalfa cyst nematode, Heterodera medicaginis
title_short DNA barcoding evidence for the North American presence of alfalfa cyst nematode, Heterodera medicaginis
title_sort dna barcoding evidence for the north american presence of alfalfa cyst nematode, heterodera medicaginis
topic Life Sciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6929643/
https://www.ncbi.nlm.nih.gov/pubmed/31088028
http://dx.doi.org/10.21307/jofnem-2019-016
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