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Quantitative Systems Pharmacology and Physiologically‐Based Pharmacokinetic Modeling With mrgsolve: A Hands‐On Tutorial
mrgsolve is an open‐source R package available on the Comprehensive R Archive Network. It combines R and C++ coding for simulation from hierarchical, ordinary differential equation–based models. Its efficient simulation engine and integration into a parallelizable, R‐based workflow makes mrgsolve a...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6930861/ https://www.ncbi.nlm.nih.gov/pubmed/31652028 http://dx.doi.org/10.1002/psp4.12467 |
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author | Elmokadem, Ahmed Riggs, Matthew M. Baron, Kyle T. |
author_facet | Elmokadem, Ahmed Riggs, Matthew M. Baron, Kyle T. |
author_sort | Elmokadem, Ahmed |
collection | PubMed |
description | mrgsolve is an open‐source R package available on the Comprehensive R Archive Network. It combines R and C++ coding for simulation from hierarchical, ordinary differential equation–based models. Its efficient simulation engine and integration into a parallelizable, R‐based workflow makes mrgsolve a convenient tool both for simple and complex models and thus is ideal for physiologically‐based pharmacokinetic (PBPK) and quantitative systems pharmacology (QSP) model. This tutorial will first introduce the basics of the mrgsolve simulation workflow, including model specification, the introduction of interventions (dosing events) into the simulation, and simulated results postprocessing. An applied simulation example is then presented using a PBPK model for voriconazole, including a model validation step against adult and pediatric data sets. A final simulation example is then presented using a previously published QSP model for mitogen‐activated protein kinase signaling in colorectal cancer, illustrating population simulation of different combination therapies. |
format | Online Article Text |
id | pubmed-6930861 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-69308612019-12-27 Quantitative Systems Pharmacology and Physiologically‐Based Pharmacokinetic Modeling With mrgsolve: A Hands‐On Tutorial Elmokadem, Ahmed Riggs, Matthew M. Baron, Kyle T. CPT Pharmacometrics Syst Pharmacol Tutorial mrgsolve is an open‐source R package available on the Comprehensive R Archive Network. It combines R and C++ coding for simulation from hierarchical, ordinary differential equation–based models. Its efficient simulation engine and integration into a parallelizable, R‐based workflow makes mrgsolve a convenient tool both for simple and complex models and thus is ideal for physiologically‐based pharmacokinetic (PBPK) and quantitative systems pharmacology (QSP) model. This tutorial will first introduce the basics of the mrgsolve simulation workflow, including model specification, the introduction of interventions (dosing events) into the simulation, and simulated results postprocessing. An applied simulation example is then presented using a PBPK model for voriconazole, including a model validation step against adult and pediatric data sets. A final simulation example is then presented using a previously published QSP model for mitogen‐activated protein kinase signaling in colorectal cancer, illustrating population simulation of different combination therapies. John Wiley and Sons Inc. 2019-11-14 2019-12 /pmc/articles/PMC6930861/ /pubmed/31652028 http://dx.doi.org/10.1002/psp4.12467 Text en © 2019 Metrum Research Group. CPT: Pharmacometrics & Systems Pharmacology published by Wiley Periodicals, Inc. on behalf of the American Society for Clinical Pharmacology and Therapeutics. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Tutorial Elmokadem, Ahmed Riggs, Matthew M. Baron, Kyle T. Quantitative Systems Pharmacology and Physiologically‐Based Pharmacokinetic Modeling With mrgsolve: A Hands‐On Tutorial |
title |
Quantitative Systems Pharmacology and Physiologically‐Based Pharmacokinetic Modeling With mrgsolve: A Hands‐On Tutorial |
title_full |
Quantitative Systems Pharmacology and Physiologically‐Based Pharmacokinetic Modeling With mrgsolve: A Hands‐On Tutorial |
title_fullStr |
Quantitative Systems Pharmacology and Physiologically‐Based Pharmacokinetic Modeling With mrgsolve: A Hands‐On Tutorial |
title_full_unstemmed |
Quantitative Systems Pharmacology and Physiologically‐Based Pharmacokinetic Modeling With mrgsolve: A Hands‐On Tutorial |
title_short |
Quantitative Systems Pharmacology and Physiologically‐Based Pharmacokinetic Modeling With mrgsolve: A Hands‐On Tutorial |
title_sort | quantitative systems pharmacology and physiologically‐based pharmacokinetic modeling with mrgsolve: a hands‐on tutorial |
topic | Tutorial |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6930861/ https://www.ncbi.nlm.nih.gov/pubmed/31652028 http://dx.doi.org/10.1002/psp4.12467 |
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