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Functional variant of IL33 is associated with survival of osteosarcoma patients

OBJECTIVES: Previous genome-wide association study showed that GLDC/IL33 loci were associated with overall survival in patients with osteosarcoma (OS). We performed a replication study to explore whether variants of GLDC/IL33 are associated with the survival of OS patients and to further verify thei...

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Autores principales: Lin, Qingxi, Han, Jingjing, Sun, Qi, Wen, Li, Wang, Shoufeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6931128/
https://www.ncbi.nlm.nih.gov/pubmed/31890491
http://dx.doi.org/10.1016/j.jbo.2019.100270
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author Lin, Qingxi
Han, Jingjing
Sun, Qi
Wen, Li
Wang, Shoufeng
author_facet Lin, Qingxi
Han, Jingjing
Sun, Qi
Wen, Li
Wang, Shoufeng
author_sort Lin, Qingxi
collection PubMed
description OBJECTIVES: Previous genome-wide association study showed that GLDC/IL33 loci were associated with overall survival in patients with osteosarcoma (OS). We performed a replication study to explore whether variants of GLDC/IL33 are associated with the survival of OS patients and to further verify their functional role in the gene expression. METHODS: A total of 216 patients with OS were enrolled. The overall survival time was calculated from the date of diagnosis till the date of last follow-up or mortality. Two SNPs were genotyped, including rs55933544 and rs74438701. OS specimens were obtained from 72 patients during surgery. The gene expression level of IL33 and GLDC was evaluated by qPCR. Patients were classified into two groups according to the 5-year overall survival (death/survival). The chi-square test was used to analyze difference of genotype frequency. The Student t-test was used to compare the gene expression level between different genotypes. Cumulative survival time was calculated by the Kaplan–Meier method and analyzed by the log-rank test. RESULTS: Genotype TT of rs55933544 was significantly associated with the event of death (0.176 vs. 0.061, p < 0.001). Patients with no risk allele T of rs55933544 showed a 5-year overall survival of 81.4% (110/141), which was significantly higher than an overall survival of 55.0% (29/54) for patients with one risk allele and 44.8% (12/21) for patients with two risk alleles (p < 0.01). Genotype TT of rs55933544 were indicative of remarkably lower expression of IL33 than genotype CC (0.00041 ± 0.00025 vs. 0.00065 ± 0.00031, p = 0.04). Patients with low IL33 expression presented remarkably worse survival as compared with the patients with high IL33 expression (p < .01) CONCLUSIONS: Variant rs55933544 was associated with the survival time of OS patients. IL33 may contribute to a poor prognosis of OS. Further investigation into the biological mechanisms by which IL33 influences the overall survival can shed light on the improvement of clinical outcome for OS patients.
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spelling pubmed-69311282019-12-30 Functional variant of IL33 is associated with survival of osteosarcoma patients Lin, Qingxi Han, Jingjing Sun, Qi Wen, Li Wang, Shoufeng J Bone Oncol Research Article OBJECTIVES: Previous genome-wide association study showed that GLDC/IL33 loci were associated with overall survival in patients with osteosarcoma (OS). We performed a replication study to explore whether variants of GLDC/IL33 are associated with the survival of OS patients and to further verify their functional role in the gene expression. METHODS: A total of 216 patients with OS were enrolled. The overall survival time was calculated from the date of diagnosis till the date of last follow-up or mortality. Two SNPs were genotyped, including rs55933544 and rs74438701. OS specimens were obtained from 72 patients during surgery. The gene expression level of IL33 and GLDC was evaluated by qPCR. Patients were classified into two groups according to the 5-year overall survival (death/survival). The chi-square test was used to analyze difference of genotype frequency. The Student t-test was used to compare the gene expression level between different genotypes. Cumulative survival time was calculated by the Kaplan–Meier method and analyzed by the log-rank test. RESULTS: Genotype TT of rs55933544 was significantly associated with the event of death (0.176 vs. 0.061, p < 0.001). Patients with no risk allele T of rs55933544 showed a 5-year overall survival of 81.4% (110/141), which was significantly higher than an overall survival of 55.0% (29/54) for patients with one risk allele and 44.8% (12/21) for patients with two risk alleles (p < 0.01). Genotype TT of rs55933544 were indicative of remarkably lower expression of IL33 than genotype CC (0.00041 ± 0.00025 vs. 0.00065 ± 0.00031, p = 0.04). Patients with low IL33 expression presented remarkably worse survival as compared with the patients with high IL33 expression (p < .01) CONCLUSIONS: Variant rs55933544 was associated with the survival time of OS patients. IL33 may contribute to a poor prognosis of OS. Further investigation into the biological mechanisms by which IL33 influences the overall survival can shed light on the improvement of clinical outcome for OS patients. Elsevier 2019-12-02 /pmc/articles/PMC6931128/ /pubmed/31890491 http://dx.doi.org/10.1016/j.jbo.2019.100270 Text en © 2019 Published by Elsevier GmbH. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Article
Lin, Qingxi
Han, Jingjing
Sun, Qi
Wen, Li
Wang, Shoufeng
Functional variant of IL33 is associated with survival of osteosarcoma patients
title Functional variant of IL33 is associated with survival of osteosarcoma patients
title_full Functional variant of IL33 is associated with survival of osteosarcoma patients
title_fullStr Functional variant of IL33 is associated with survival of osteosarcoma patients
title_full_unstemmed Functional variant of IL33 is associated with survival of osteosarcoma patients
title_short Functional variant of IL33 is associated with survival of osteosarcoma patients
title_sort functional variant of il33 is associated with survival of osteosarcoma patients
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6931128/
https://www.ncbi.nlm.nih.gov/pubmed/31890491
http://dx.doi.org/10.1016/j.jbo.2019.100270
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