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Robust immunoscore model to predict the response to anti-PD1 therapy in melanoma
This study aimed to construct immune-related predictors to identify responders to anti-PD1 therapy of melanoma through CIBERSORT algorithm. Using the least absolute shrinkage and selection operator (LASSO) logistic regression, we constructed an immunoscore consisting of 8 immune subsets to predict t...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6932919/ https://www.ncbi.nlm.nih.gov/pubmed/31796647 http://dx.doi.org/10.18632/aging.102556 |
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author | Nie, Run-Cong Yuan, Shu-Qiang Wang, Yun Chen, Ying-Bo Cai, Yan-Yu Chen, Shi Li, Shu-Man Zhou, Jie Chen, Guo-Ming Luo, Tian-Qi Zhou, Zhi-Wei Li, Yuan-Fang |
author_facet | Nie, Run-Cong Yuan, Shu-Qiang Wang, Yun Chen, Ying-Bo Cai, Yan-Yu Chen, Shi Li, Shu-Man Zhou, Jie Chen, Guo-Ming Luo, Tian-Qi Zhou, Zhi-Wei Li, Yuan-Fang |
author_sort | Nie, Run-Cong |
collection | PubMed |
description | This study aimed to construct immune-related predictors to identify responders to anti-PD1 therapy of melanoma through CIBERSORT algorithm. Using the least absolute shrinkage and selection operator (LASSO) logistic regression, we constructed an immunoscore consisting of 8 immune subsets to predict the anti-PD1 response. This score achieved an overall accuracy of AUC = 0.77, 0.80 and 0.73 in the training cohort, validation cohort and on-anti-PD1 cohort, respectively. Patients with high immunoscores had significantly higher objective response rates (ORRs) than did those with low immunoscores (ORR: 53.8% vs 17.7%, P < 0.001 for entire pre-anti-PD1 cohort; 42.1% vs 15.1%, P = 0.022 for on-anti-PD1 cohort; 66.7% vs 16.7%, P = 0.038 for neoadjuvant anti-PD1 cohort). Prolonged survival trends were observed in high-immunoscore group (1-year PFS: 42.4% vs 14.3%, P = 0.059; 3-year OS: 41.5% vs 31.6%, P = 0.057). Furthermore, we found that high-immunoscore group exhibited higher fractions of tumor-infiltrating lymphocytes and an increased IFN-γ response. Analysis of the results of the GSEA indicated a significant enrichment of antitumor immunity pathways in the high-immunoscore group. Therefore, this study indicated that we constructed a robust immunoscore model to predict the anti-PD1 response of metastatic melanoma and the neoadjuvant anti-PD1 response of resectable melanoma. |
format | Online Article Text |
id | pubmed-6932919 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-69329192020-01-03 Robust immunoscore model to predict the response to anti-PD1 therapy in melanoma Nie, Run-Cong Yuan, Shu-Qiang Wang, Yun Chen, Ying-Bo Cai, Yan-Yu Chen, Shi Li, Shu-Man Zhou, Jie Chen, Guo-Ming Luo, Tian-Qi Zhou, Zhi-Wei Li, Yuan-Fang Aging (Albany NY) Research Paper This study aimed to construct immune-related predictors to identify responders to anti-PD1 therapy of melanoma through CIBERSORT algorithm. Using the least absolute shrinkage and selection operator (LASSO) logistic regression, we constructed an immunoscore consisting of 8 immune subsets to predict the anti-PD1 response. This score achieved an overall accuracy of AUC = 0.77, 0.80 and 0.73 in the training cohort, validation cohort and on-anti-PD1 cohort, respectively. Patients with high immunoscores had significantly higher objective response rates (ORRs) than did those with low immunoscores (ORR: 53.8% vs 17.7%, P < 0.001 for entire pre-anti-PD1 cohort; 42.1% vs 15.1%, P = 0.022 for on-anti-PD1 cohort; 66.7% vs 16.7%, P = 0.038 for neoadjuvant anti-PD1 cohort). Prolonged survival trends were observed in high-immunoscore group (1-year PFS: 42.4% vs 14.3%, P = 0.059; 3-year OS: 41.5% vs 31.6%, P = 0.057). Furthermore, we found that high-immunoscore group exhibited higher fractions of tumor-infiltrating lymphocytes and an increased IFN-γ response. Analysis of the results of the GSEA indicated a significant enrichment of antitumor immunity pathways in the high-immunoscore group. Therefore, this study indicated that we constructed a robust immunoscore model to predict the anti-PD1 response of metastatic melanoma and the neoadjuvant anti-PD1 response of resectable melanoma. Impact Journals 2019-12-03 /pmc/articles/PMC6932919/ /pubmed/31796647 http://dx.doi.org/10.18632/aging.102556 Text en Copyright © 2019 Nie et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Nie, Run-Cong Yuan, Shu-Qiang Wang, Yun Chen, Ying-Bo Cai, Yan-Yu Chen, Shi Li, Shu-Man Zhou, Jie Chen, Guo-Ming Luo, Tian-Qi Zhou, Zhi-Wei Li, Yuan-Fang Robust immunoscore model to predict the response to anti-PD1 therapy in melanoma |
title | Robust immunoscore model to predict the response to anti-PD1 therapy in melanoma |
title_full | Robust immunoscore model to predict the response to anti-PD1 therapy in melanoma |
title_fullStr | Robust immunoscore model to predict the response to anti-PD1 therapy in melanoma |
title_full_unstemmed | Robust immunoscore model to predict the response to anti-PD1 therapy in melanoma |
title_short | Robust immunoscore model to predict the response to anti-PD1 therapy in melanoma |
title_sort | robust immunoscore model to predict the response to anti-pd1 therapy in melanoma |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6932919/ https://www.ncbi.nlm.nih.gov/pubmed/31796647 http://dx.doi.org/10.18632/aging.102556 |
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