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An efficient simulated annealing algorithm for the RNA secondary structure prediction with Pseudoknots

BACKGROUND: RNA pseudoknot structures play an important role in biological processes. However, existing RNA secondary structure prediction algorithms cannot predict the pseudoknot structure efficiently. Although random matching can improve the number of base pairs, these non-consecutive base pairs c...

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Detalles Bibliográficos
Autores principales: Kai, Zhang, Yuting, Wang, Yulin, Lv, Jun, Liu, Juanjuan, He
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6933665/
https://www.ncbi.nlm.nih.gov/pubmed/31881969
http://dx.doi.org/10.1186/s12864-019-6300-2