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Multi‐trait genomic selection for weevil resistance, growth, and wood quality in Norway spruce

Plantation‐grown trees have to cope with an increasing pressure of pest and disease in the context of climate change, and breeding approaches using genomics may offer efficient and flexible tools to face this pressure. In the present study, we targeted genetic improvement of resistance of an introdu...

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Autores principales: Lenz, Patrick R. N., Nadeau, Simon, Mottet, Marie‐Josée, Perron, Martin, Isabel, Nathalie, Beaulieu, Jean, Bousquet, Jean
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6935592/
https://www.ncbi.nlm.nih.gov/pubmed/31892945
http://dx.doi.org/10.1111/eva.12823
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author Lenz, Patrick R. N.
Nadeau, Simon
Mottet, Marie‐Josée
Perron, Martin
Isabel, Nathalie
Beaulieu, Jean
Bousquet, Jean
author_facet Lenz, Patrick R. N.
Nadeau, Simon
Mottet, Marie‐Josée
Perron, Martin
Isabel, Nathalie
Beaulieu, Jean
Bousquet, Jean
author_sort Lenz, Patrick R. N.
collection PubMed
description Plantation‐grown trees have to cope with an increasing pressure of pest and disease in the context of climate change, and breeding approaches using genomics may offer efficient and flexible tools to face this pressure. In the present study, we targeted genetic improvement of resistance of an introduced conifer species in Canada, Norway spruce (Picea abies (L.) Karst.), to the native white pine weevil (Pissodes strobi Peck). We developed single‐ and multi‐trait genomic selection (GS) models and selection indices considering the relationships between weevil resistance, intrinsic wood quality, and growth traits. Weevil resistance, acoustic velocity as a proxy for mechanical wood stiffness, and average wood density showed moderate‐to‐high heritability and low genotype‐by‐environment interactions. Weevil resistance was genetically positively correlated with tree height, height‐to‐diameter at breast height (DBH) ratio, and acoustic velocity. The accuracy of the different GS models tested (GBLUP, threshold GBLUP, Bayesian ridge regression, BayesCπ) was high and did not differ among each other. Multi‐trait models performed similarly as single‐trait models when all trees were phenotyped. However, when weevil attack data were not available for all trees, weevil resistance was more accurately predicted by integrating genetically correlated growth traits into multi‐trait GS models. A GS index that corresponded to the breeders’ priorities achieved near maximum gains for weevil resistance, acoustic velocity, and height growth, but a small decrease for DBH. The results of this study indicate that it is possible to breed for high‐quality, weevil‐resistant Norway spruce reforestation stock with high accuracy achieved from single‐trait or multi‐trait GS.
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spelling pubmed-69355922019-12-31 Multi‐trait genomic selection for weevil resistance, growth, and wood quality in Norway spruce Lenz, Patrick R. N. Nadeau, Simon Mottet, Marie‐Josée Perron, Martin Isabel, Nathalie Beaulieu, Jean Bousquet, Jean Evol Appl Special Issue Original Articles Plantation‐grown trees have to cope with an increasing pressure of pest and disease in the context of climate change, and breeding approaches using genomics may offer efficient and flexible tools to face this pressure. In the present study, we targeted genetic improvement of resistance of an introduced conifer species in Canada, Norway spruce (Picea abies (L.) Karst.), to the native white pine weevil (Pissodes strobi Peck). We developed single‐ and multi‐trait genomic selection (GS) models and selection indices considering the relationships between weevil resistance, intrinsic wood quality, and growth traits. Weevil resistance, acoustic velocity as a proxy for mechanical wood stiffness, and average wood density showed moderate‐to‐high heritability and low genotype‐by‐environment interactions. Weevil resistance was genetically positively correlated with tree height, height‐to‐diameter at breast height (DBH) ratio, and acoustic velocity. The accuracy of the different GS models tested (GBLUP, threshold GBLUP, Bayesian ridge regression, BayesCπ) was high and did not differ among each other. Multi‐trait models performed similarly as single‐trait models when all trees were phenotyped. However, when weevil attack data were not available for all trees, weevil resistance was more accurately predicted by integrating genetically correlated growth traits into multi‐trait GS models. A GS index that corresponded to the breeders’ priorities achieved near maximum gains for weevil resistance, acoustic velocity, and height growth, but a small decrease for DBH. The results of this study indicate that it is possible to breed for high‐quality, weevil‐resistant Norway spruce reforestation stock with high accuracy achieved from single‐trait or multi‐trait GS. John Wiley and Sons Inc. 2019-06-20 /pmc/articles/PMC6935592/ /pubmed/31892945 http://dx.doi.org/10.1111/eva.12823 Text en © 2019 Her Majesty the Queen in Right of Canada. Environmental DNA published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Special Issue Original Articles
Lenz, Patrick R. N.
Nadeau, Simon
Mottet, Marie‐Josée
Perron, Martin
Isabel, Nathalie
Beaulieu, Jean
Bousquet, Jean
Multi‐trait genomic selection for weevil resistance, growth, and wood quality in Norway spruce
title Multi‐trait genomic selection for weevil resistance, growth, and wood quality in Norway spruce
title_full Multi‐trait genomic selection for weevil resistance, growth, and wood quality in Norway spruce
title_fullStr Multi‐trait genomic selection for weevil resistance, growth, and wood quality in Norway spruce
title_full_unstemmed Multi‐trait genomic selection for weevil resistance, growth, and wood quality in Norway spruce
title_short Multi‐trait genomic selection for weevil resistance, growth, and wood quality in Norway spruce
title_sort multi‐trait genomic selection for weevil resistance, growth, and wood quality in norway spruce
topic Special Issue Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6935592/
https://www.ncbi.nlm.nih.gov/pubmed/31892945
http://dx.doi.org/10.1111/eva.12823
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