Cargando…
Utilizing network pharmacology to explore the underlying mechanism of Radix Salviae in diabetic retinopathy
INTRODUCTION: Radix Salviae (Dan-shen in pinyin), a classic Chinese herb, has been extensively used to treat diabetic retinopathy in clinical practice in China for many years. However, the pharmacological mechanisms of Radix Salviae remain vague. The aim of this study was to decrypt the underlying m...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6936117/ https://www.ncbi.nlm.nih.gov/pubmed/31892939 http://dx.doi.org/10.1186/s13020-019-0280-7 |
_version_ | 1783483686062129152 |
---|---|
author | Piao, Chun-Li Luo, Jin-Li Jin, De Tang, Cheng Wang, Li Lian, Feng-Mei Tong, Xiao-Lin |
author_facet | Piao, Chun-Li Luo, Jin-Li Jin, De Tang, Cheng Wang, Li Lian, Feng-Mei Tong, Xiao-Lin |
author_sort | Piao, Chun-Li |
collection | PubMed |
description | INTRODUCTION: Radix Salviae (Dan-shen in pinyin), a classic Chinese herb, has been extensively used to treat diabetic retinopathy in clinical practice in China for many years. However, the pharmacological mechanisms of Radix Salviae remain vague. The aim of this study was to decrypt the underlying mechanisms of Radix Salviae in the treatment of diabetic retinopathy using a systems pharmacology approach. METHODS: A network pharmacology-based strategy was proposed to elucidate the underlying multi-component, multi-target, and multi-pathway mode of action of Radix Salviae against diabetic retinopathy. First, we collected putative targets of Radix Salviae based on the Traditional Chinese Medicine System Pharmacology database and a network of the interactions among the putative targets of Radix Salviae and known therapeutic targets of diabetic retinopathy was built. Then, two topological parameters, “degree” and “closeness certainty” were calculated to identify the major targets in the network. Furthermore, the major hubs were imported to the Database for Annotation, Visualization and Integrated Discovery to perform a pathway enrichment analysis. RESULTS: A total of 130 nodes, including 18 putative targets of Radix Salviae, were observed to be major hubs in terms of topological importance. The results of pathway enrichment analysis indicated that putative targets of Radix Salviae mostly participated in various pathways associated with angiogenesis, protein metabolism, inflammatory response, apoptosis, and cell proliferation. The putative targets of Radix Salviae (vascular endothelial growth factor, matrix metalloproteinases, plasminogen, insulin-like growth factor-1, and cyclooxygenase-2) were recognized as active factors involved in the main biological functions of treatment, which implied that these were involved in the underlying mechanisms of Radix Salviae on diabetic retinopathy. CONCLUSIONS: Radix Salviae could alleviate diabetic retinopathy via the molecular mechanisms predicted by network pharmacology. This research demonstrates that the network pharmacology approach can be an effective tool to reveal the mechanisms of traditional Chinese medicine from a holistic perspective. |
format | Online Article Text |
id | pubmed-6936117 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-69361172019-12-31 Utilizing network pharmacology to explore the underlying mechanism of Radix Salviae in diabetic retinopathy Piao, Chun-Li Luo, Jin-Li Jin, De Tang, Cheng Wang, Li Lian, Feng-Mei Tong, Xiao-Lin Chin Med Research INTRODUCTION: Radix Salviae (Dan-shen in pinyin), a classic Chinese herb, has been extensively used to treat diabetic retinopathy in clinical practice in China for many years. However, the pharmacological mechanisms of Radix Salviae remain vague. The aim of this study was to decrypt the underlying mechanisms of Radix Salviae in the treatment of diabetic retinopathy using a systems pharmacology approach. METHODS: A network pharmacology-based strategy was proposed to elucidate the underlying multi-component, multi-target, and multi-pathway mode of action of Radix Salviae against diabetic retinopathy. First, we collected putative targets of Radix Salviae based on the Traditional Chinese Medicine System Pharmacology database and a network of the interactions among the putative targets of Radix Salviae and known therapeutic targets of diabetic retinopathy was built. Then, two topological parameters, “degree” and “closeness certainty” were calculated to identify the major targets in the network. Furthermore, the major hubs were imported to the Database for Annotation, Visualization and Integrated Discovery to perform a pathway enrichment analysis. RESULTS: A total of 130 nodes, including 18 putative targets of Radix Salviae, were observed to be major hubs in terms of topological importance. The results of pathway enrichment analysis indicated that putative targets of Radix Salviae mostly participated in various pathways associated with angiogenesis, protein metabolism, inflammatory response, apoptosis, and cell proliferation. The putative targets of Radix Salviae (vascular endothelial growth factor, matrix metalloproteinases, plasminogen, insulin-like growth factor-1, and cyclooxygenase-2) were recognized as active factors involved in the main biological functions of treatment, which implied that these were involved in the underlying mechanisms of Radix Salviae on diabetic retinopathy. CONCLUSIONS: Radix Salviae could alleviate diabetic retinopathy via the molecular mechanisms predicted by network pharmacology. This research demonstrates that the network pharmacology approach can be an effective tool to reveal the mechanisms of traditional Chinese medicine from a holistic perspective. BioMed Central 2019-12-30 /pmc/articles/PMC6936117/ /pubmed/31892939 http://dx.doi.org/10.1186/s13020-019-0280-7 Text en © The Author(s) 2019 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Piao, Chun-Li Luo, Jin-Li Jin, De Tang, Cheng Wang, Li Lian, Feng-Mei Tong, Xiao-Lin Utilizing network pharmacology to explore the underlying mechanism of Radix Salviae in diabetic retinopathy |
title | Utilizing network pharmacology to explore the underlying mechanism of Radix Salviae in diabetic retinopathy |
title_full | Utilizing network pharmacology to explore the underlying mechanism of Radix Salviae in diabetic retinopathy |
title_fullStr | Utilizing network pharmacology to explore the underlying mechanism of Radix Salviae in diabetic retinopathy |
title_full_unstemmed | Utilizing network pharmacology to explore the underlying mechanism of Radix Salviae in diabetic retinopathy |
title_short | Utilizing network pharmacology to explore the underlying mechanism of Radix Salviae in diabetic retinopathy |
title_sort | utilizing network pharmacology to explore the underlying mechanism of radix salviae in diabetic retinopathy |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6936117/ https://www.ncbi.nlm.nih.gov/pubmed/31892939 http://dx.doi.org/10.1186/s13020-019-0280-7 |
work_keys_str_mv | AT piaochunli utilizingnetworkpharmacologytoexploretheunderlyingmechanismofradixsalviaeindiabeticretinopathy AT luojinli utilizingnetworkpharmacologytoexploretheunderlyingmechanismofradixsalviaeindiabeticretinopathy AT jinde utilizingnetworkpharmacologytoexploretheunderlyingmechanismofradixsalviaeindiabeticretinopathy AT tangcheng utilizingnetworkpharmacologytoexploretheunderlyingmechanismofradixsalviaeindiabeticretinopathy AT wangli utilizingnetworkpharmacologytoexploretheunderlyingmechanismofradixsalviaeindiabeticretinopathy AT lianfengmei utilizingnetworkpharmacologytoexploretheunderlyingmechanismofradixsalviaeindiabeticretinopathy AT tongxiaolin utilizingnetworkpharmacologytoexploretheunderlyingmechanismofradixsalviaeindiabeticretinopathy |