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Analytical dataset of short-term heat stress induced reshuffling of metabolism and transcriptomes in maize grown under elevated CO(2)

This data article describes the analysis of sudden heat stress (SHS) induced transcriptomes and metabolism in SQ maize cultivar (Zea mays L. cv. Silver Queen). Plants were grown under elevated CO(2) in both field based open top chambers (OTCs) and indoor growth chamber conditions [1]. After 20 days...

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Detalles Bibliográficos
Autores principales: Essemine, Jemaa, Li, Jikai, Chen, Genyun, Qu, Mingnan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6939058/
https://www.ncbi.nlm.nih.gov/pubmed/31909108
http://dx.doi.org/10.1016/j.dib.2019.105004
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author Essemine, Jemaa
Li, Jikai
Chen, Genyun
Qu, Mingnan
author_facet Essemine, Jemaa
Li, Jikai
Chen, Genyun
Qu, Mingnan
author_sort Essemine, Jemaa
collection PubMed
description This data article describes the analysis of sudden heat stress (SHS) induced transcriptomes and metabolism in SQ maize cultivar (Zea mays L. cv. Silver Queen). Plants were grown under elevated CO(2) in both field based open top chambers (OTCs) and indoor growth chamber conditions [1]. After 20 days after radicle emergence, intact leaf section of maize was exposed for 2 hours to SHS treatment. Samples were stored in liquid nitrogen immediately and used thereafter for metabolism and transcriptomes determinations. Metabolism consisting of 37 targeted metabolites together with corresponding reference standard were determined by gas chromatography coupled to mass spectrometry (GC-MS). Total RNA was extracted using TRIzol® reagent according to the manufacturer's instructions (Invitrogen, Carlsbad, CA). RNA integrity was assessed using RNA Nano 6000 Assay Kit of the Agilent Bioanalyzer 2100 system (Agilent Technologies, CA, USA). Transcriptomes were determined by Illumina Hiseq 4000 platform. Further interpretation and discussion on these datasets can be found in the related article entitled “Elevated CO(2) concentrations may alleviate the detrimental effects of sudden heat stress on photosynthetic carbon metabolism in maize” [1].
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spelling pubmed-69390582020-01-06 Analytical dataset of short-term heat stress induced reshuffling of metabolism and transcriptomes in maize grown under elevated CO(2) Essemine, Jemaa Li, Jikai Chen, Genyun Qu, Mingnan Data Brief Agricultural and Biological Science This data article describes the analysis of sudden heat stress (SHS) induced transcriptomes and metabolism in SQ maize cultivar (Zea mays L. cv. Silver Queen). Plants were grown under elevated CO(2) in both field based open top chambers (OTCs) and indoor growth chamber conditions [1]. After 20 days after radicle emergence, intact leaf section of maize was exposed for 2 hours to SHS treatment. Samples were stored in liquid nitrogen immediately and used thereafter for metabolism and transcriptomes determinations. Metabolism consisting of 37 targeted metabolites together with corresponding reference standard were determined by gas chromatography coupled to mass spectrometry (GC-MS). Total RNA was extracted using TRIzol® reagent according to the manufacturer's instructions (Invitrogen, Carlsbad, CA). RNA integrity was assessed using RNA Nano 6000 Assay Kit of the Agilent Bioanalyzer 2100 system (Agilent Technologies, CA, USA). Transcriptomes were determined by Illumina Hiseq 4000 platform. Further interpretation and discussion on these datasets can be found in the related article entitled “Elevated CO(2) concentrations may alleviate the detrimental effects of sudden heat stress on photosynthetic carbon metabolism in maize” [1]. Elsevier 2019-12-17 /pmc/articles/PMC6939058/ /pubmed/31909108 http://dx.doi.org/10.1016/j.dib.2019.105004 Text en © 2019 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Agricultural and Biological Science
Essemine, Jemaa
Li, Jikai
Chen, Genyun
Qu, Mingnan
Analytical dataset of short-term heat stress induced reshuffling of metabolism and transcriptomes in maize grown under elevated CO(2)
title Analytical dataset of short-term heat stress induced reshuffling of metabolism and transcriptomes in maize grown under elevated CO(2)
title_full Analytical dataset of short-term heat stress induced reshuffling of metabolism and transcriptomes in maize grown under elevated CO(2)
title_fullStr Analytical dataset of short-term heat stress induced reshuffling of metabolism and transcriptomes in maize grown under elevated CO(2)
title_full_unstemmed Analytical dataset of short-term heat stress induced reshuffling of metabolism and transcriptomes in maize grown under elevated CO(2)
title_short Analytical dataset of short-term heat stress induced reshuffling of metabolism and transcriptomes in maize grown under elevated CO(2)
title_sort analytical dataset of short-term heat stress induced reshuffling of metabolism and transcriptomes in maize grown under elevated co(2)
topic Agricultural and Biological Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6939058/
https://www.ncbi.nlm.nih.gov/pubmed/31909108
http://dx.doi.org/10.1016/j.dib.2019.105004
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