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The Detection and Partial Localisation of Heteroplasmic Mutations in the Mitochondrial Genome of Patients with Diabetic Retinopathy

Diabetic retinopathy (DR) is a common complication of diabetes and a major cause of acquired blindness in adults. Mitochondria are cellular organelles involved in energy production which contain mitochondrial DNA (mtDNA). We previously showed that levels of circulating mtDNA were dysregulated in DR...

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Autores principales: Malik, Afshan N., Rosa, Hannah S., S. de Menezes, Eliane, Tamang, Priyanka, Hamid, Zaidi, Naik, Anita, Parsade, Chandani Kiran, Sivaprasad, Sobha
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6940788/
https://www.ncbi.nlm.nih.gov/pubmed/31835862
http://dx.doi.org/10.3390/ijms20246259
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author Malik, Afshan N.
Rosa, Hannah S.
S. de Menezes, Eliane
Tamang, Priyanka
Hamid, Zaidi
Naik, Anita
Parsade, Chandani Kiran
Sivaprasad, Sobha
author_facet Malik, Afshan N.
Rosa, Hannah S.
S. de Menezes, Eliane
Tamang, Priyanka
Hamid, Zaidi
Naik, Anita
Parsade, Chandani Kiran
Sivaprasad, Sobha
author_sort Malik, Afshan N.
collection PubMed
description Diabetic retinopathy (DR) is a common complication of diabetes and a major cause of acquired blindness in adults. Mitochondria are cellular organelles involved in energy production which contain mitochondrial DNA (mtDNA). We previously showed that levels of circulating mtDNA were dysregulated in DR patients, and there was some evidence of mtDNA damage. In the current project, our aim was to confirm the presence of, and determine the location and prevalence of, mtDNA mutation in DR. DNA isolated from peripheral blood from diabetes patients (n = 59) with and without DR was used to amplify specific mtDNA regions which were digested with surveyor nuclease S1 to determine the presence and location of heteroplasmic mtDNA mutations were present. An initial screen of the entire mtDNA genome of 6 DR patients detected a higher prevalence of mutations in amplicon P, covering nucleotides 14,443 to 1066 and spanning the control region. Further analysis of 42 subjects showed the presence of putative mutations in amplicon P in 36% (14/39) of DR subjects and in 10% (2/20) non-DR subjects. The prevalence of mutations in DR was not related to the severity of the disease. The detection of a high-prevalence of putative mtDNA mutations within a specific region of the mitochondrial genome supports the view that mtDNA damage contributes to DR. The exact location and functional impact of these mutations remains to be determined.
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spelling pubmed-69407882020-01-09 The Detection and Partial Localisation of Heteroplasmic Mutations in the Mitochondrial Genome of Patients with Diabetic Retinopathy Malik, Afshan N. Rosa, Hannah S. S. de Menezes, Eliane Tamang, Priyanka Hamid, Zaidi Naik, Anita Parsade, Chandani Kiran Sivaprasad, Sobha Int J Mol Sci Article Diabetic retinopathy (DR) is a common complication of diabetes and a major cause of acquired blindness in adults. Mitochondria are cellular organelles involved in energy production which contain mitochondrial DNA (mtDNA). We previously showed that levels of circulating mtDNA were dysregulated in DR patients, and there was some evidence of mtDNA damage. In the current project, our aim was to confirm the presence of, and determine the location and prevalence of, mtDNA mutation in DR. DNA isolated from peripheral blood from diabetes patients (n = 59) with and without DR was used to amplify specific mtDNA regions which were digested with surveyor nuclease S1 to determine the presence and location of heteroplasmic mtDNA mutations were present. An initial screen of the entire mtDNA genome of 6 DR patients detected a higher prevalence of mutations in amplicon P, covering nucleotides 14,443 to 1066 and spanning the control region. Further analysis of 42 subjects showed the presence of putative mutations in amplicon P in 36% (14/39) of DR subjects and in 10% (2/20) non-DR subjects. The prevalence of mutations in DR was not related to the severity of the disease. The detection of a high-prevalence of putative mtDNA mutations within a specific region of the mitochondrial genome supports the view that mtDNA damage contributes to DR. The exact location and functional impact of these mutations remains to be determined. MDPI 2019-12-11 /pmc/articles/PMC6940788/ /pubmed/31835862 http://dx.doi.org/10.3390/ijms20246259 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Malik, Afshan N.
Rosa, Hannah S.
S. de Menezes, Eliane
Tamang, Priyanka
Hamid, Zaidi
Naik, Anita
Parsade, Chandani Kiran
Sivaprasad, Sobha
The Detection and Partial Localisation of Heteroplasmic Mutations in the Mitochondrial Genome of Patients with Diabetic Retinopathy
title The Detection and Partial Localisation of Heteroplasmic Mutations in the Mitochondrial Genome of Patients with Diabetic Retinopathy
title_full The Detection and Partial Localisation of Heteroplasmic Mutations in the Mitochondrial Genome of Patients with Diabetic Retinopathy
title_fullStr The Detection and Partial Localisation of Heteroplasmic Mutations in the Mitochondrial Genome of Patients with Diabetic Retinopathy
title_full_unstemmed The Detection and Partial Localisation of Heteroplasmic Mutations in the Mitochondrial Genome of Patients with Diabetic Retinopathy
title_short The Detection and Partial Localisation of Heteroplasmic Mutations in the Mitochondrial Genome of Patients with Diabetic Retinopathy
title_sort detection and partial localisation of heteroplasmic mutations in the mitochondrial genome of patients with diabetic retinopathy
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6940788/
https://www.ncbi.nlm.nih.gov/pubmed/31835862
http://dx.doi.org/10.3390/ijms20246259
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