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gutMDisorder: a comprehensive database for dysbiosis of the gut microbiota in disorders and interventions

gutMDisorder (http://bio-annotation.cn/gutMDisorder), a manually curated database, aims at providing a comprehensive resource of dysbiosis of the gut microbiota in disorders and interventions. Alterations in the composition of the gut microbial community play crucial roles in the development of chro...

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Detalles Bibliográficos
Autores principales: Cheng, Liang, Qi, Changlu, Zhuang, He, Fu, Tongze, Zhang, Xue
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6943049/
https://www.ncbi.nlm.nih.gov/pubmed/31584099
http://dx.doi.org/10.1093/nar/gkz843
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author Cheng, Liang
Qi, Changlu
Zhuang, He
Fu, Tongze
Zhang, Xue
author_facet Cheng, Liang
Qi, Changlu
Zhuang, He
Fu, Tongze
Zhang, Xue
author_sort Cheng, Liang
collection PubMed
description gutMDisorder (http://bio-annotation.cn/gutMDisorder), a manually curated database, aims at providing a comprehensive resource of dysbiosis of the gut microbiota in disorders and interventions. Alterations in the composition of the gut microbial community play crucial roles in the development of chronic disorders. And the beneficial effects of drugs, foods and other intervention measures on disorders could be microbially mediated. The current version of gutMDisorder documents 2263 curated associations between 579 gut microbes and 123 disorders or 77 intervention measures in Human, and 930 curated associations between 273 gut microbes and 33 disorders or 151 intervention measures in Mouse. Each entry in the gutMDisorder contains detailed information on an association, including an intestinal microbe, a disorder name, intervention measures, experimental technology and platform, characteristic of samples, web sites for downloading the sequencing data, a brief description of the association, a literature reference, and so on. gutMDisorder provides a user-friendly interface to browse, retrieve each entry using gut microbes, disorders, and intervention measures. It also offers pages for downloading all the entries and submitting new experimentally validated associations.
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spelling pubmed-69430492020-01-08 gutMDisorder: a comprehensive database for dysbiosis of the gut microbiota in disorders and interventions Cheng, Liang Qi, Changlu Zhuang, He Fu, Tongze Zhang, Xue Nucleic Acids Res Database Issue gutMDisorder (http://bio-annotation.cn/gutMDisorder), a manually curated database, aims at providing a comprehensive resource of dysbiosis of the gut microbiota in disorders and interventions. Alterations in the composition of the gut microbial community play crucial roles in the development of chronic disorders. And the beneficial effects of drugs, foods and other intervention measures on disorders could be microbially mediated. The current version of gutMDisorder documents 2263 curated associations between 579 gut microbes and 123 disorders or 77 intervention measures in Human, and 930 curated associations between 273 gut microbes and 33 disorders or 151 intervention measures in Mouse. Each entry in the gutMDisorder contains detailed information on an association, including an intestinal microbe, a disorder name, intervention measures, experimental technology and platform, characteristic of samples, web sites for downloading the sequencing data, a brief description of the association, a literature reference, and so on. gutMDisorder provides a user-friendly interface to browse, retrieve each entry using gut microbes, disorders, and intervention measures. It also offers pages for downloading all the entries and submitting new experimentally validated associations. Oxford University Press 2020-01-08 2019-10-04 /pmc/articles/PMC6943049/ /pubmed/31584099 http://dx.doi.org/10.1093/nar/gkz843 Text en © The Author(s) 2019. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Database Issue
Cheng, Liang
Qi, Changlu
Zhuang, He
Fu, Tongze
Zhang, Xue
gutMDisorder: a comprehensive database for dysbiosis of the gut microbiota in disorders and interventions
title gutMDisorder: a comprehensive database for dysbiosis of the gut microbiota in disorders and interventions
title_full gutMDisorder: a comprehensive database for dysbiosis of the gut microbiota in disorders and interventions
title_fullStr gutMDisorder: a comprehensive database for dysbiosis of the gut microbiota in disorders and interventions
title_full_unstemmed gutMDisorder: a comprehensive database for dysbiosis of the gut microbiota in disorders and interventions
title_short gutMDisorder: a comprehensive database for dysbiosis of the gut microbiota in disorders and interventions
title_sort gutmdisorder: a comprehensive database for dysbiosis of the gut microbiota in disorders and interventions
topic Database Issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6943049/
https://www.ncbi.nlm.nih.gov/pubmed/31584099
http://dx.doi.org/10.1093/nar/gkz843
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