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The 1:2 co-crystal formed between N,N′-bis(pyridin-4-ylmeth­yl)ethanedi­amide and benzoic acid: crystal structure, Hirshfeld surface analysis and computational study

The crystal and mol­ecular structures of the title 1:2 co-crystal, C(14)H(14)N(4)O(2)·2C(7)H(6)O(2), are described. The oxalamide mol­ecule has a (+)-anti­periplanar conformation with the 4-pyridyl residues lying to either side of the central, almost planar C(2)N(2)O(2) chromophore (r.m.s. deviation...

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Autores principales: Tan, Sang Loon, Tiekink, Edward R. T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6944079/
https://www.ncbi.nlm.nih.gov/pubmed/31921461
http://dx.doi.org/10.1107/S2056989019016840
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author Tan, Sang Loon
Tiekink, Edward R. T.
author_facet Tan, Sang Loon
Tiekink, Edward R. T.
author_sort Tan, Sang Loon
collection PubMed
description The crystal and mol­ecular structures of the title 1:2 co-crystal, C(14)H(14)N(4)O(2)·2C(7)H(6)O(2), are described. The oxalamide mol­ecule has a (+)-anti­periplanar conformation with the 4-pyridyl residues lying to either side of the central, almost planar C(2)N(2)O(2) chromophore (r.m.s. deviation = 0.0555 Å). The benzoic acid mol­ecules have equivalent, close to planar conformations [C(6)/CO(2) dihedral angle = 6.33 (14) and 3.43 (10)°]. The formation of hy­droxy-O—H⋯N(pyrid­yl) hydrogen bonds between the benzoic acid mol­ecules and the pyridyl residues of the di­amide leads to a three-mol­ecule aggregate. Centrosymmetrically related aggregates assemble into a six-mol­ecule aggregate via amide-N—H⋯O(amide) hydrogen bonds through a 10-membered {⋯HNC(2)O}(2) synthon. These are linked into a supra­molecular tape via amide-N—H⋯O(carbon­yl) hydrogen bonds and 22-membered {⋯HOCO⋯NC(4)NH}(2) synthons. The contacts between tapes to consolidate the three-dimensional architecture are of the type methyl­ene-C—H⋯O(amide) and pyridyl-C—H⋯O(carbon­yl). These inter­actions are largely electrostatic in nature. Additional non-covalent contacts are identified from an analysis of the calculated Hirshfeld surfaces.
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spelling pubmed-69440792020-01-09 The 1:2 co-crystal formed between N,N′-bis(pyridin-4-ylmeth­yl)ethanedi­amide and benzoic acid: crystal structure, Hirshfeld surface analysis and computational study Tan, Sang Loon Tiekink, Edward R. T. Acta Crystallogr E Crystallogr Commun Research Communications The crystal and mol­ecular structures of the title 1:2 co-crystal, C(14)H(14)N(4)O(2)·2C(7)H(6)O(2), are described. The oxalamide mol­ecule has a (+)-anti­periplanar conformation with the 4-pyridyl residues lying to either side of the central, almost planar C(2)N(2)O(2) chromophore (r.m.s. deviation = 0.0555 Å). The benzoic acid mol­ecules have equivalent, close to planar conformations [C(6)/CO(2) dihedral angle = 6.33 (14) and 3.43 (10)°]. The formation of hy­droxy-O—H⋯N(pyrid­yl) hydrogen bonds between the benzoic acid mol­ecules and the pyridyl residues of the di­amide leads to a three-mol­ecule aggregate. Centrosymmetrically related aggregates assemble into a six-mol­ecule aggregate via amide-N—H⋯O(amide) hydrogen bonds through a 10-membered {⋯HNC(2)O}(2) synthon. These are linked into a supra­molecular tape via amide-N—H⋯O(carbon­yl) hydrogen bonds and 22-membered {⋯HOCO⋯NC(4)NH}(2) synthons. The contacts between tapes to consolidate the three-dimensional architecture are of the type methyl­ene-C—H⋯O(amide) and pyridyl-C—H⋯O(carbon­yl). These inter­actions are largely electrostatic in nature. Additional non-covalent contacts are identified from an analysis of the calculated Hirshfeld surfaces. International Union of Crystallography 2020-01-01 /pmc/articles/PMC6944079/ /pubmed/31921461 http://dx.doi.org/10.1107/S2056989019016840 Text en © Tan and Tiekink 2020 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Research Communications
Tan, Sang Loon
Tiekink, Edward R. T.
The 1:2 co-crystal formed between N,N′-bis(pyridin-4-ylmeth­yl)ethanedi­amide and benzoic acid: crystal structure, Hirshfeld surface analysis and computational study
title The 1:2 co-crystal formed between N,N′-bis(pyridin-4-ylmeth­yl)ethanedi­amide and benzoic acid: crystal structure, Hirshfeld surface analysis and computational study
title_full The 1:2 co-crystal formed between N,N′-bis(pyridin-4-ylmeth­yl)ethanedi­amide and benzoic acid: crystal structure, Hirshfeld surface analysis and computational study
title_fullStr The 1:2 co-crystal formed between N,N′-bis(pyridin-4-ylmeth­yl)ethanedi­amide and benzoic acid: crystal structure, Hirshfeld surface analysis and computational study
title_full_unstemmed The 1:2 co-crystal formed between N,N′-bis(pyridin-4-ylmeth­yl)ethanedi­amide and benzoic acid: crystal structure, Hirshfeld surface analysis and computational study
title_short The 1:2 co-crystal formed between N,N′-bis(pyridin-4-ylmeth­yl)ethanedi­amide and benzoic acid: crystal structure, Hirshfeld surface analysis and computational study
title_sort 1:2 co-crystal formed between n,n′-bis(pyridin-4-ylmeth­yl)ethanedi­amide and benzoic acid: crystal structure, hirshfeld surface analysis and computational study
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6944079/
https://www.ncbi.nlm.nih.gov/pubmed/31921461
http://dx.doi.org/10.1107/S2056989019016840
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