Cargando…

Ras isoforms: signaling specificities in CD40 pathway

BACKGROUND: Ras are small cellular GTPases which regulate diverse cellular processes. It has three isoforms: H-Ras, K-Ras, and N-Ras. Owing to the N-terminus (1–165 residues) sequence homology these isoforms were thought to be functionally redundant. However, only K-Ras-deficient mice but not H-Ras-...

Descripción completa

Detalles Bibliográficos
Autores principales: Nair, Arathi, Chakraborty, Sushmita, Banerji, Late Anirban, Srivastava, Ankita, Navare, Charudutta, Saha, Bhaskar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6945409/
https://www.ncbi.nlm.nih.gov/pubmed/31906952
http://dx.doi.org/10.1186/s12964-019-0497-1
_version_ 1783485172919828480
author Nair, Arathi
Chakraborty, Sushmita
Banerji, Late Anirban
Srivastava, Ankita
Navare, Charudutta
Saha, Bhaskar
author_facet Nair, Arathi
Chakraborty, Sushmita
Banerji, Late Anirban
Srivastava, Ankita
Navare, Charudutta
Saha, Bhaskar
author_sort Nair, Arathi
collection PubMed
description BACKGROUND: Ras are small cellular GTPases which regulate diverse cellular processes. It has three isoforms: H-Ras, K-Ras, and N-Ras. Owing to the N-terminus (1–165 residues) sequence homology these isoforms were thought to be functionally redundant. However, only K-Ras-deficient mice but not H-Ras- and N-Ras-deficient mice show embryonic lethality. Similarly, mutations in a given Ras isoform are associated with a particular type of cancer. Moreover, we have previously reported that Ras isoforms perform unique functions in Leishmania major infection. Thus, Ras isoforms are implicated to have signaling and functional specificity but the mechanism remains to be elucidated. RESULT: Using CD40 as a model receptor, we showed that depending on the strength of signaling, specific Ras isoforms are activated. Weak CD40 signal activates N-Ras, whereas strong signal activates H-Ras and K-Ras. Additionally, we showed that suppression of N-Ras expression reduced CD40-induced extracellular signal–regulated kinase-1/2 (ERK-1/2) activation and Interleukin (IL)-10 production; whereas suppression of H-Ras or K-Ras reduced CD40-induced p38 mitogen-activated protein kinase (p38MAPK) activation and IL-12 production. Furthermore, we showed that Ras isoforms have activator (GEF) specificity as weak CD40 signal-activated N-Ras requires Sos-1/2 whereas strong CD40 signal-activated H-Ras/K-Ras requires Ras-GRP as the guanine-nucleotide exchange factor (GEF) inducing ERK-1/2- or p38MAPK-mediated IL-10 or IL-12 productions, respectively, in macrophages. Silencing of syk reduced CD40-induced N-Ras activation but silencing of lyn inhibited H-Ras and K-Ras activation. In CD40 signaling, Ras isoforms also showed effector specificity; while H-Ras and K-Ras showed specificity for phosphatidyl inositol-3 kinase activation at high dose of CD40 stimulation, N-Ras primarily associated with Raf-1 at low dose of CD40 stimulation. Moreover, fractal analysis showed that functional site surface roughness for H-Ras (SurfaceFD = 2.39) and K-Ras (SurfaceFD = 2.39) are similar but significantly different from N-Ras (SurfaceFD = 2.25). CONCLUSION: The activator and effector specificities of Ras isoforms in CD40 signaling indicated their differential involvement in CD40 pathway and in maintaining the reciprocity. Our observations reveal Ras-regulated signaling outcome and its potential for developing Ras isoform-targeted immunotherapy and prophylaxis. GRAPHICAL ABSTRACT: [Image: see text]
format Online
Article
Text
id pubmed-6945409
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-69454092020-01-09 Ras isoforms: signaling specificities in CD40 pathway Nair, Arathi Chakraborty, Sushmita Banerji, Late Anirban Srivastava, Ankita Navare, Charudutta Saha, Bhaskar Cell Commun Signal Research BACKGROUND: Ras are small cellular GTPases which regulate diverse cellular processes. It has three isoforms: H-Ras, K-Ras, and N-Ras. Owing to the N-terminus (1–165 residues) sequence homology these isoforms were thought to be functionally redundant. However, only K-Ras-deficient mice but not H-Ras- and N-Ras-deficient mice show embryonic lethality. Similarly, mutations in a given Ras isoform are associated with a particular type of cancer. Moreover, we have previously reported that Ras isoforms perform unique functions in Leishmania major infection. Thus, Ras isoforms are implicated to have signaling and functional specificity but the mechanism remains to be elucidated. RESULT: Using CD40 as a model receptor, we showed that depending on the strength of signaling, specific Ras isoforms are activated. Weak CD40 signal activates N-Ras, whereas strong signal activates H-Ras and K-Ras. Additionally, we showed that suppression of N-Ras expression reduced CD40-induced extracellular signal–regulated kinase-1/2 (ERK-1/2) activation and Interleukin (IL)-10 production; whereas suppression of H-Ras or K-Ras reduced CD40-induced p38 mitogen-activated protein kinase (p38MAPK) activation and IL-12 production. Furthermore, we showed that Ras isoforms have activator (GEF) specificity as weak CD40 signal-activated N-Ras requires Sos-1/2 whereas strong CD40 signal-activated H-Ras/K-Ras requires Ras-GRP as the guanine-nucleotide exchange factor (GEF) inducing ERK-1/2- or p38MAPK-mediated IL-10 or IL-12 productions, respectively, in macrophages. Silencing of syk reduced CD40-induced N-Ras activation but silencing of lyn inhibited H-Ras and K-Ras activation. In CD40 signaling, Ras isoforms also showed effector specificity; while H-Ras and K-Ras showed specificity for phosphatidyl inositol-3 kinase activation at high dose of CD40 stimulation, N-Ras primarily associated with Raf-1 at low dose of CD40 stimulation. Moreover, fractal analysis showed that functional site surface roughness for H-Ras (SurfaceFD = 2.39) and K-Ras (SurfaceFD = 2.39) are similar but significantly different from N-Ras (SurfaceFD = 2.25). CONCLUSION: The activator and effector specificities of Ras isoforms in CD40 signaling indicated their differential involvement in CD40 pathway and in maintaining the reciprocity. Our observations reveal Ras-regulated signaling outcome and its potential for developing Ras isoform-targeted immunotherapy and prophylaxis. GRAPHICAL ABSTRACT: [Image: see text] BioMed Central 2020-01-06 /pmc/articles/PMC6945409/ /pubmed/31906952 http://dx.doi.org/10.1186/s12964-019-0497-1 Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Nair, Arathi
Chakraborty, Sushmita
Banerji, Late Anirban
Srivastava, Ankita
Navare, Charudutta
Saha, Bhaskar
Ras isoforms: signaling specificities in CD40 pathway
title Ras isoforms: signaling specificities in CD40 pathway
title_full Ras isoforms: signaling specificities in CD40 pathway
title_fullStr Ras isoforms: signaling specificities in CD40 pathway
title_full_unstemmed Ras isoforms: signaling specificities in CD40 pathway
title_short Ras isoforms: signaling specificities in CD40 pathway
title_sort ras isoforms: signaling specificities in cd40 pathway
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6945409/
https://www.ncbi.nlm.nih.gov/pubmed/31906952
http://dx.doi.org/10.1186/s12964-019-0497-1
work_keys_str_mv AT nairarathi rasisoformssignalingspecificitiesincd40pathway
AT chakrabortysushmita rasisoformssignalingspecificitiesincd40pathway
AT banerjilateanirban rasisoformssignalingspecificitiesincd40pathway
AT srivastavaankita rasisoformssignalingspecificitiesincd40pathway
AT navarecharudutta rasisoformssignalingspecificitiesincd40pathway
AT sahabhaskar rasisoformssignalingspecificitiesincd40pathway