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Liquid and Dry Swabs for Culture- and PCR-Based Detection of Colonization with Methicillin-Resistant Staphylococcus aureus during Admission Screening

Rapid detection of methicillin-resistant Staphylococcus aureus (MRSA) colonization status facilitates isolation and decolonization and reduces MRSA infections. Liquid but not dry swabs allow fully automated detection methods. However, the accuracy of culture and polymerase chain reaction (PCR) using...

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Autores principales: von Allmen, N., Gorzelniak, K., Liesenfeld, O., Njoya, M., Duncan, J., Marlowe, E. M., Hartel, T., Knaust, A., Hoppe, B., Walter, M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Akadémiai Kiadó 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6945996/
https://www.ncbi.nlm.nih.gov/pubmed/31934365
http://dx.doi.org/10.1556/1886.2019.00022
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author von Allmen, N.
Gorzelniak, K.
Liesenfeld, O.
Njoya, M.
Duncan, J.
Marlowe, E. M.
Hartel, T.
Knaust, A.
Hoppe, B.
Walter, M.
author_facet von Allmen, N.
Gorzelniak, K.
Liesenfeld, O.
Njoya, M.
Duncan, J.
Marlowe, E. M.
Hartel, T.
Knaust, A.
Hoppe, B.
Walter, M.
author_sort von Allmen, N.
collection PubMed
description Rapid detection of methicillin-resistant Staphylococcus aureus (MRSA) colonization status facilitates isolation and decolonization and reduces MRSA infections. Liquid but not dry swabs allow fully automated detection methods. However, the accuracy of culture and polymerase chain reaction (PCR) using liquid and dry swabs has not been analyzed. We compared different swab collection systems for routine nasal–throat MRSA screening in patients admitted to a tertiary care trauma center in Germany. Over 3 consecutive months, dry swabs (month 1), ESwabs (month 2), or MSwabs (month 3) were processed using Cepheid GeneXpert, Roche cobas and BD-MAX™ MRSA tests compared to chromogenic culture. Among 1680 subjects, the MRSA detection rate using PCR methods did not differ significantly between dry swabs, ESwab, and MSwab (6.0%, 6.2%, and 5.3%, respectively). Detection rates using chromogenic culture were 2.9%, 3.9%, and 1.9%, using dry, ESwab, and MSwab, respectively. Using chromogenic culture as the “gold standard”, negative predictive values for the PCR tests ranged from 99.2–100%, and positive predictive values from 33.3–54.8%. Thus, efficient and accurate MRSA screening can be achieved using dry, as well as liquid E- or MSwab, collection systems. Specimen collection using ESwab or MSwab facilitates efficient processing for chromogenic culture in full laboratory automation while also allowing molecular testing in automated PCR systems.
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spelling pubmed-69459962020-01-13 Liquid and Dry Swabs for Culture- and PCR-Based Detection of Colonization with Methicillin-Resistant Staphylococcus aureus during Admission Screening von Allmen, N. Gorzelniak, K. Liesenfeld, O. Njoya, M. Duncan, J. Marlowe, E. M. Hartel, T. Knaust, A. Hoppe, B. Walter, M. Eur J Microbiol Immunol (Bp) Original Research Paper Rapid detection of methicillin-resistant Staphylococcus aureus (MRSA) colonization status facilitates isolation and decolonization and reduces MRSA infections. Liquid but not dry swabs allow fully automated detection methods. However, the accuracy of culture and polymerase chain reaction (PCR) using liquid and dry swabs has not been analyzed. We compared different swab collection systems for routine nasal–throat MRSA screening in patients admitted to a tertiary care trauma center in Germany. Over 3 consecutive months, dry swabs (month 1), ESwabs (month 2), or MSwabs (month 3) were processed using Cepheid GeneXpert, Roche cobas and BD-MAX™ MRSA tests compared to chromogenic culture. Among 1680 subjects, the MRSA detection rate using PCR methods did not differ significantly between dry swabs, ESwab, and MSwab (6.0%, 6.2%, and 5.3%, respectively). Detection rates using chromogenic culture were 2.9%, 3.9%, and 1.9%, using dry, ESwab, and MSwab, respectively. Using chromogenic culture as the “gold standard”, negative predictive values for the PCR tests ranged from 99.2–100%, and positive predictive values from 33.3–54.8%. Thus, efficient and accurate MRSA screening can be achieved using dry, as well as liquid E- or MSwab, collection systems. Specimen collection using ESwab or MSwab facilitates efficient processing for chromogenic culture in full laboratory automation while also allowing molecular testing in automated PCR systems. Akadémiai Kiadó 2019-12-25 /pmc/articles/PMC6945996/ /pubmed/31934365 http://dx.doi.org/10.1556/1886.2019.00022 Text en © 2019, The Author(s) http://creativecommons.org/licenses/by-nc/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 International License (https://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted use, distribution, and reproduction in any medium for non-commercial purposes, provided the original author and source are credited, a link to the CC License is provided, and changes - if any – are indicated.
spellingShingle Original Research Paper
von Allmen, N.
Gorzelniak, K.
Liesenfeld, O.
Njoya, M.
Duncan, J.
Marlowe, E. M.
Hartel, T.
Knaust, A.
Hoppe, B.
Walter, M.
Liquid and Dry Swabs for Culture- and PCR-Based Detection of Colonization with Methicillin-Resistant Staphylococcus aureus during Admission Screening
title Liquid and Dry Swabs for Culture- and PCR-Based Detection of Colonization with Methicillin-Resistant Staphylococcus aureus during Admission Screening
title_full Liquid and Dry Swabs for Culture- and PCR-Based Detection of Colonization with Methicillin-Resistant Staphylococcus aureus during Admission Screening
title_fullStr Liquid and Dry Swabs for Culture- and PCR-Based Detection of Colonization with Methicillin-Resistant Staphylococcus aureus during Admission Screening
title_full_unstemmed Liquid and Dry Swabs for Culture- and PCR-Based Detection of Colonization with Methicillin-Resistant Staphylococcus aureus during Admission Screening
title_short Liquid and Dry Swabs for Culture- and PCR-Based Detection of Colonization with Methicillin-Resistant Staphylococcus aureus during Admission Screening
title_sort liquid and dry swabs for culture- and pcr-based detection of colonization with methicillin-resistant staphylococcus aureus during admission screening
topic Original Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6945996/
https://www.ncbi.nlm.nih.gov/pubmed/31934365
http://dx.doi.org/10.1556/1886.2019.00022
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