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Preliminary evidences of the presence of extracellular DNA single stranded forms in soil

The relevance of extracellular DNA (eDNA) in the soil ecosystem is becoming more and more evident to the scientific community by the progressive discovery of functions accompanying to natural gene transformation. However, despite the increased number of published articles dedicated to eDNA in soil,...

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Autores principales: Pathan, Shamina Imran, Arfaioli, Paola, Ceccherini, Maria Teresa, Ascher-Jenull, Judith, Pietramellara, Giacomo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6946138/
https://www.ncbi.nlm.nih.gov/pubmed/31910237
http://dx.doi.org/10.1371/journal.pone.0227296
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author Pathan, Shamina Imran
Arfaioli, Paola
Ceccherini, Maria Teresa
Ascher-Jenull, Judith
Pietramellara, Giacomo
author_facet Pathan, Shamina Imran
Arfaioli, Paola
Ceccherini, Maria Teresa
Ascher-Jenull, Judith
Pietramellara, Giacomo
author_sort Pathan, Shamina Imran
collection PubMed
description The relevance of extracellular DNA (eDNA) in the soil ecosystem is becoming more and more evident to the scientific community by the progressive discovery of functions accompanying to natural gene transformation. However, despite the increased number of published articles dedicated to eDNA in soil, so far only few are focused on its single stranded form (eDNAss). The present paper is the first to investigate the quantitative relevance of eDNAss in the total soil eDNA pool, discriminating between its linear (eDNAssl) and circular (eDNAssc) forms and the respective weakly (wa) and tightly (ta) adsorbed fractions. The results showed the prevalence of eDNAss and its linear form in both the total soil eDNA pool and its wa and ta fractions. Both of the eDNAss fractions (linear and circular) were characterized by small fragments.
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spelling pubmed-69461382020-01-17 Preliminary evidences of the presence of extracellular DNA single stranded forms in soil Pathan, Shamina Imran Arfaioli, Paola Ceccherini, Maria Teresa Ascher-Jenull, Judith Pietramellara, Giacomo PLoS One Research Article The relevance of extracellular DNA (eDNA) in the soil ecosystem is becoming more and more evident to the scientific community by the progressive discovery of functions accompanying to natural gene transformation. However, despite the increased number of published articles dedicated to eDNA in soil, so far only few are focused on its single stranded form (eDNAss). The present paper is the first to investigate the quantitative relevance of eDNAss in the total soil eDNA pool, discriminating between its linear (eDNAssl) and circular (eDNAssc) forms and the respective weakly (wa) and tightly (ta) adsorbed fractions. The results showed the prevalence of eDNAss and its linear form in both the total soil eDNA pool and its wa and ta fractions. Both of the eDNAss fractions (linear and circular) were characterized by small fragments. Public Library of Science 2020-01-07 /pmc/articles/PMC6946138/ /pubmed/31910237 http://dx.doi.org/10.1371/journal.pone.0227296 Text en © 2020 Pathan et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Pathan, Shamina Imran
Arfaioli, Paola
Ceccherini, Maria Teresa
Ascher-Jenull, Judith
Pietramellara, Giacomo
Preliminary evidences of the presence of extracellular DNA single stranded forms in soil
title Preliminary evidences of the presence of extracellular DNA single stranded forms in soil
title_full Preliminary evidences of the presence of extracellular DNA single stranded forms in soil
title_fullStr Preliminary evidences of the presence of extracellular DNA single stranded forms in soil
title_full_unstemmed Preliminary evidences of the presence of extracellular DNA single stranded forms in soil
title_short Preliminary evidences of the presence of extracellular DNA single stranded forms in soil
title_sort preliminary evidences of the presence of extracellular dna single stranded forms in soil
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6946138/
https://www.ncbi.nlm.nih.gov/pubmed/31910237
http://dx.doi.org/10.1371/journal.pone.0227296
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