Cargando…
Preliminary evidences of the presence of extracellular DNA single stranded forms in soil
The relevance of extracellular DNA (eDNA) in the soil ecosystem is becoming more and more evident to the scientific community by the progressive discovery of functions accompanying to natural gene transformation. However, despite the increased number of published articles dedicated to eDNA in soil,...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6946138/ https://www.ncbi.nlm.nih.gov/pubmed/31910237 http://dx.doi.org/10.1371/journal.pone.0227296 |
_version_ | 1783485296839491584 |
---|---|
author | Pathan, Shamina Imran Arfaioli, Paola Ceccherini, Maria Teresa Ascher-Jenull, Judith Pietramellara, Giacomo |
author_facet | Pathan, Shamina Imran Arfaioli, Paola Ceccherini, Maria Teresa Ascher-Jenull, Judith Pietramellara, Giacomo |
author_sort | Pathan, Shamina Imran |
collection | PubMed |
description | The relevance of extracellular DNA (eDNA) in the soil ecosystem is becoming more and more evident to the scientific community by the progressive discovery of functions accompanying to natural gene transformation. However, despite the increased number of published articles dedicated to eDNA in soil, so far only few are focused on its single stranded form (eDNAss). The present paper is the first to investigate the quantitative relevance of eDNAss in the total soil eDNA pool, discriminating between its linear (eDNAssl) and circular (eDNAssc) forms and the respective weakly (wa) and tightly (ta) adsorbed fractions. The results showed the prevalence of eDNAss and its linear form in both the total soil eDNA pool and its wa and ta fractions. Both of the eDNAss fractions (linear and circular) were characterized by small fragments. |
format | Online Article Text |
id | pubmed-6946138 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-69461382020-01-17 Preliminary evidences of the presence of extracellular DNA single stranded forms in soil Pathan, Shamina Imran Arfaioli, Paola Ceccherini, Maria Teresa Ascher-Jenull, Judith Pietramellara, Giacomo PLoS One Research Article The relevance of extracellular DNA (eDNA) in the soil ecosystem is becoming more and more evident to the scientific community by the progressive discovery of functions accompanying to natural gene transformation. However, despite the increased number of published articles dedicated to eDNA in soil, so far only few are focused on its single stranded form (eDNAss). The present paper is the first to investigate the quantitative relevance of eDNAss in the total soil eDNA pool, discriminating between its linear (eDNAssl) and circular (eDNAssc) forms and the respective weakly (wa) and tightly (ta) adsorbed fractions. The results showed the prevalence of eDNAss and its linear form in both the total soil eDNA pool and its wa and ta fractions. Both of the eDNAss fractions (linear and circular) were characterized by small fragments. Public Library of Science 2020-01-07 /pmc/articles/PMC6946138/ /pubmed/31910237 http://dx.doi.org/10.1371/journal.pone.0227296 Text en © 2020 Pathan et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Pathan, Shamina Imran Arfaioli, Paola Ceccherini, Maria Teresa Ascher-Jenull, Judith Pietramellara, Giacomo Preliminary evidences of the presence of extracellular DNA single stranded forms in soil |
title | Preliminary evidences of the presence of extracellular DNA single stranded forms in soil |
title_full | Preliminary evidences of the presence of extracellular DNA single stranded forms in soil |
title_fullStr | Preliminary evidences of the presence of extracellular DNA single stranded forms in soil |
title_full_unstemmed | Preliminary evidences of the presence of extracellular DNA single stranded forms in soil |
title_short | Preliminary evidences of the presence of extracellular DNA single stranded forms in soil |
title_sort | preliminary evidences of the presence of extracellular dna single stranded forms in soil |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6946138/ https://www.ncbi.nlm.nih.gov/pubmed/31910237 http://dx.doi.org/10.1371/journal.pone.0227296 |
work_keys_str_mv | AT pathanshaminaimran preliminaryevidencesofthepresenceofextracellulardnasinglestrandedformsinsoil AT arfaiolipaola preliminaryevidencesofthepresenceofextracellulardnasinglestrandedformsinsoil AT ceccherinimariateresa preliminaryevidencesofthepresenceofextracellulardnasinglestrandedformsinsoil AT ascherjenulljudith preliminaryevidencesofthepresenceofextracellulardnasinglestrandedformsinsoil AT pietramellaragiacomo preliminaryevidencesofthepresenceofextracellulardnasinglestrandedformsinsoil |