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A network analysis revealed the essential and common downstream proteins related to inguinal hernia
Although more than 1 in 4 men develop symptomatic inguinal hernia during their lifetime, the molecular mechanism behind inguinal hernia remains unknown. Here, we explored the protein-protein interaction network built on known inguinal hernia-causative genes to identify essential and common downstrea...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6946160/ https://www.ncbi.nlm.nih.gov/pubmed/31910207 http://dx.doi.org/10.1371/journal.pone.0226885 |
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author | Mao, Yimin Chen, Le Li, Jianghua Shangguan, Anna Junjie Kujawa, Stacy Zhao, Hong |
author_facet | Mao, Yimin Chen, Le Li, Jianghua Shangguan, Anna Junjie Kujawa, Stacy Zhao, Hong |
author_sort | Mao, Yimin |
collection | PubMed |
description | Although more than 1 in 4 men develop symptomatic inguinal hernia during their lifetime, the molecular mechanism behind inguinal hernia remains unknown. Here, we explored the protein-protein interaction network built on known inguinal hernia-causative genes to identify essential and common downstream proteins for inguinal hernia formation. We discovered that PIK3R1, PTPN11, TGFBR1, CDC42, SOS1, and KRAS were the most essential inguinal hernia-causative proteins and UBC, GRB2, CTNNB1, HSP90AA1, CBL, PLCG1, and CRK were listed as the most commonly-involved downstream proteins. In addition, the transmembrane receptor protein tyrosine kinase signaling pathway was the most frequently found inguinal hernia-related pathway. Our in silico approach was able to uncover a novel molecular mechanism underlying inguinal hernia formation by identifying inguinal hernia-related essential proteins and potential common downstream proteins of inguinal hernia-causative proteins. |
format | Online Article Text |
id | pubmed-6946160 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-69461602020-01-17 A network analysis revealed the essential and common downstream proteins related to inguinal hernia Mao, Yimin Chen, Le Li, Jianghua Shangguan, Anna Junjie Kujawa, Stacy Zhao, Hong PLoS One Research Article Although more than 1 in 4 men develop symptomatic inguinal hernia during their lifetime, the molecular mechanism behind inguinal hernia remains unknown. Here, we explored the protein-protein interaction network built on known inguinal hernia-causative genes to identify essential and common downstream proteins for inguinal hernia formation. We discovered that PIK3R1, PTPN11, TGFBR1, CDC42, SOS1, and KRAS were the most essential inguinal hernia-causative proteins and UBC, GRB2, CTNNB1, HSP90AA1, CBL, PLCG1, and CRK were listed as the most commonly-involved downstream proteins. In addition, the transmembrane receptor protein tyrosine kinase signaling pathway was the most frequently found inguinal hernia-related pathway. Our in silico approach was able to uncover a novel molecular mechanism underlying inguinal hernia formation by identifying inguinal hernia-related essential proteins and potential common downstream proteins of inguinal hernia-causative proteins. Public Library of Science 2020-01-07 /pmc/articles/PMC6946160/ /pubmed/31910207 http://dx.doi.org/10.1371/journal.pone.0226885 Text en © 2020 Mao et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Mao, Yimin Chen, Le Li, Jianghua Shangguan, Anna Junjie Kujawa, Stacy Zhao, Hong A network analysis revealed the essential and common downstream proteins related to inguinal hernia |
title | A network analysis revealed the essential and common downstream proteins related to inguinal hernia |
title_full | A network analysis revealed the essential and common downstream proteins related to inguinal hernia |
title_fullStr | A network analysis revealed the essential and common downstream proteins related to inguinal hernia |
title_full_unstemmed | A network analysis revealed the essential and common downstream proteins related to inguinal hernia |
title_short | A network analysis revealed the essential and common downstream proteins related to inguinal hernia |
title_sort | network analysis revealed the essential and common downstream proteins related to inguinal hernia |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6946160/ https://www.ncbi.nlm.nih.gov/pubmed/31910207 http://dx.doi.org/10.1371/journal.pone.0226885 |
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