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Bladder cancer survival nomogram: Development and validation of a prediction tool, using the SEER and TCGA databases

Bladder cancer (BC) is a common malignancy associated with high morbidity and mortality, however, accurate and convenient risk assessment tools applicable to BC patients are currently lacking. Previous studies using nomograms to evaluate bladder cancer (BC) survival have been based on small samples....

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Autores principales: Zhang, Ye, Hong, Ying-kai, Zhuang, Dong-wu, He, Xue-jun, Lin, Ming-en
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Wolters Kluwer Health 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6946294/
https://www.ncbi.nlm.nih.gov/pubmed/31689813
http://dx.doi.org/10.1097/MD.0000000000017725
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author Zhang, Ye
Hong, Ying-kai
Zhuang, Dong-wu
He, Xue-jun
Lin, Ming-en
author_facet Zhang, Ye
Hong, Ying-kai
Zhuang, Dong-wu
He, Xue-jun
Lin, Ming-en
author_sort Zhang, Ye
collection PubMed
description Bladder cancer (BC) is a common malignancy associated with high morbidity and mortality, however, accurate and convenient risk assessment tools applicable to BC patients are currently lacking. Previous studies using nomograms to evaluate bladder cancer (BC) survival have been based on small samples. Using a large dataset, this study aimed to construct more precise clinical nomograms to effectively predict bladder cancer survival. Data on patients with pathologically-confirmed bladder cancer were extracted from the Surveillance, Epidemiology, and End Results (SEER) database. Additional BC patient data for an external validation cohort were extracted from the Cancer Genome Atlas (TCGA) database. Clinical parameters that constituted potential risk factors were reviewed and analyzed using univariate and multivariate Cox proportional hazards regression. A nomogram was constructed with parameters that significantly correlated with the overall survival (OS). Prognostic performance of a nomogram was assessed using the concordance index (c-index), area under the receiver operating characteristic curve (AUC), and a calibration curve. The model was then tested with data from an internal and external validation cohort. Patients’ survival was analyzed and compared with the Kaplan-Meier (KM) method. Multivariate Cox regression showed that age, sex, race, stage_T1, stage_T2a, stage_T2b, stage_T3a, stage_Ta, stage_Tis, stage_N, stage_M were independent predictors of BC survival. A nomogram was constructed based on these factors. The c-index of the nomogram was 0.7916 (95% confidence interval CI, 0.79–0.80). The calibration curve showed excellent agreement between the predicted and observed values. The c-index for the internal validation cohort was 0.7917 (95% CI 0.79-0.80), which was higher than for the training cohort, suggesting robustness of the model. For the training cohort, the AUC for the 3- and the 5-year survival was 0.82 and 0.813, respectively. The c-index for the TNM-based model was superior to that for the AJCC-TNM classification. The models presented in this study might be suitable for clinical use, supporting clinicians in their individualized assessment of expected survival in BC patients. They might also be used as a layered tool for clinical research.
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spelling pubmed-69462942020-01-31 Bladder cancer survival nomogram: Development and validation of a prediction tool, using the SEER and TCGA databases Zhang, Ye Hong, Ying-kai Zhuang, Dong-wu He, Xue-jun Lin, Ming-en Medicine (Baltimore) 7300 Bladder cancer (BC) is a common malignancy associated with high morbidity and mortality, however, accurate and convenient risk assessment tools applicable to BC patients are currently lacking. Previous studies using nomograms to evaluate bladder cancer (BC) survival have been based on small samples. Using a large dataset, this study aimed to construct more precise clinical nomograms to effectively predict bladder cancer survival. Data on patients with pathologically-confirmed bladder cancer were extracted from the Surveillance, Epidemiology, and End Results (SEER) database. Additional BC patient data for an external validation cohort were extracted from the Cancer Genome Atlas (TCGA) database. Clinical parameters that constituted potential risk factors were reviewed and analyzed using univariate and multivariate Cox proportional hazards regression. A nomogram was constructed with parameters that significantly correlated with the overall survival (OS). Prognostic performance of a nomogram was assessed using the concordance index (c-index), area under the receiver operating characteristic curve (AUC), and a calibration curve. The model was then tested with data from an internal and external validation cohort. Patients’ survival was analyzed and compared with the Kaplan-Meier (KM) method. Multivariate Cox regression showed that age, sex, race, stage_T1, stage_T2a, stage_T2b, stage_T3a, stage_Ta, stage_Tis, stage_N, stage_M were independent predictors of BC survival. A nomogram was constructed based on these factors. The c-index of the nomogram was 0.7916 (95% confidence interval CI, 0.79–0.80). The calibration curve showed excellent agreement between the predicted and observed values. The c-index for the internal validation cohort was 0.7917 (95% CI 0.79-0.80), which was higher than for the training cohort, suggesting robustness of the model. For the training cohort, the AUC for the 3- and the 5-year survival was 0.82 and 0.813, respectively. The c-index for the TNM-based model was superior to that for the AJCC-TNM classification. The models presented in this study might be suitable for clinical use, supporting clinicians in their individualized assessment of expected survival in BC patients. They might also be used as a layered tool for clinical research. Wolters Kluwer Health 2019-11-01 /pmc/articles/PMC6946294/ /pubmed/31689813 http://dx.doi.org/10.1097/MD.0000000000017725 Text en Copyright © 2019 the Author(s). Published by Wolters Kluwer Health, Inc. http://creativecommons.org/licenses/by-nc/4.0 This is an open access article distributed under the terms of the Creative Commons Attribution-Non Commercial License 4.0 (CCBY-NC), where it is permissible to download, share, remix, transform, and buildup the work provided it is properly cited. The work cannot be used commercially without permission from the journal. http://creativecommons.org/licenses/by-nc/4.0
spellingShingle 7300
Zhang, Ye
Hong, Ying-kai
Zhuang, Dong-wu
He, Xue-jun
Lin, Ming-en
Bladder cancer survival nomogram: Development and validation of a prediction tool, using the SEER and TCGA databases
title Bladder cancer survival nomogram: Development and validation of a prediction tool, using the SEER and TCGA databases
title_full Bladder cancer survival nomogram: Development and validation of a prediction tool, using the SEER and TCGA databases
title_fullStr Bladder cancer survival nomogram: Development and validation of a prediction tool, using the SEER and TCGA databases
title_full_unstemmed Bladder cancer survival nomogram: Development and validation of a prediction tool, using the SEER and TCGA databases
title_short Bladder cancer survival nomogram: Development and validation of a prediction tool, using the SEER and TCGA databases
title_sort bladder cancer survival nomogram: development and validation of a prediction tool, using the seer and tcga databases
topic 7300
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6946294/
https://www.ncbi.nlm.nih.gov/pubmed/31689813
http://dx.doi.org/10.1097/MD.0000000000017725
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