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Association of single nucleotide polymorphisms in the 3′UTR region of TPM1 gene with dilated cardiomyopathy: A case-control study

Tropomyosin 1 (TPM1) is a protein that constitutes the sarcomere filaments and is encoded by the TPM1 gene. The aim of the present study is to investigate the correlation between the 3′ untranslated region (3′UTR) single nucleotide polymorphisms (SNPs) of the TPM1 gene and dilated cardiomyopathy (DC...

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Autores principales: Yao, Qiang, Zhang, Wei, Zhang, Tianjie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Wolters Kluwer Health 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6946328/
https://www.ncbi.nlm.nih.gov/pubmed/31689804
http://dx.doi.org/10.1097/MD.0000000000017710
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author Yao, Qiang
Zhang, Wei
Zhang, Tianjie
author_facet Yao, Qiang
Zhang, Wei
Zhang, Tianjie
author_sort Yao, Qiang
collection PubMed
description Tropomyosin 1 (TPM1) is a protein that constitutes the sarcomere filaments and is encoded by the TPM1 gene. The aim of the present study is to investigate the correlation between the 3′ untranslated region (3′UTR) single nucleotide polymorphisms (SNPs) of the TPM1 gene and dilated cardiomyopathy (DCM). A total of 245 patients with DCM and 245 healthy controls were recruited with 5 ml of venous blood. Genomic DNA was extracted to analyze the TPM1 gene rs12148828, rs11558748, rs707602, rs6738, rs7178040 loci genotypes, and the plasma miR-21 level was analyzed by reverse transcription-PCR (RT-PCR). The risk of DCM development in the rs6738 locus G allele carriers were 1.69 times more than A allele carriers (95% CI: 1.22-2.33, P = .001). Age and gender had no effect on the association of TPM1 gene SNPs with DCM risk (P > .05). The plasma miR-21 level of TPM1 gene rs6738 locus AA carriers was significantly higher than that of the AG and GG genotypes (P < .001). The SNPs of TPM1 gene rs6738 locus is associated with the risk of DCM, which may be related to the abnormal increase of miR-21 level in DCM patients, but further research is needed to prove the causal relationship between miR-21 level and DCM risk.
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spelling pubmed-69463282020-01-31 Association of single nucleotide polymorphisms in the 3′UTR region of TPM1 gene with dilated cardiomyopathy: A case-control study Yao, Qiang Zhang, Wei Zhang, Tianjie Medicine (Baltimore) 3400 Tropomyosin 1 (TPM1) is a protein that constitutes the sarcomere filaments and is encoded by the TPM1 gene. The aim of the present study is to investigate the correlation between the 3′ untranslated region (3′UTR) single nucleotide polymorphisms (SNPs) of the TPM1 gene and dilated cardiomyopathy (DCM). A total of 245 patients with DCM and 245 healthy controls were recruited with 5 ml of venous blood. Genomic DNA was extracted to analyze the TPM1 gene rs12148828, rs11558748, rs707602, rs6738, rs7178040 loci genotypes, and the plasma miR-21 level was analyzed by reverse transcription-PCR (RT-PCR). The risk of DCM development in the rs6738 locus G allele carriers were 1.69 times more than A allele carriers (95% CI: 1.22-2.33, P = .001). Age and gender had no effect on the association of TPM1 gene SNPs with DCM risk (P > .05). The plasma miR-21 level of TPM1 gene rs6738 locus AA carriers was significantly higher than that of the AG and GG genotypes (P < .001). The SNPs of TPM1 gene rs6738 locus is associated with the risk of DCM, which may be related to the abnormal increase of miR-21 level in DCM patients, but further research is needed to prove the causal relationship between miR-21 level and DCM risk. Wolters Kluwer Health 2019-11-01 /pmc/articles/PMC6946328/ /pubmed/31689804 http://dx.doi.org/10.1097/MD.0000000000017710 Text en Copyright © 2019 the Author(s). Published by Wolters Kluwer Health, Inc. http://creativecommons.org/licenses/by-nc/4.0 This is an open access article distributed under the terms of the Creative Commons Attribution-Non Commercial License 4.0 (CCBY-NC), where it is permissible to download, share, remix, transform, and buildup the work provided it is properly cited. The work cannot be used commercially without permission from the journal. http://creativecommons.org/licenses/by-nc/4.0
spellingShingle 3400
Yao, Qiang
Zhang, Wei
Zhang, Tianjie
Association of single nucleotide polymorphisms in the 3′UTR region of TPM1 gene with dilated cardiomyopathy: A case-control study
title Association of single nucleotide polymorphisms in the 3′UTR region of TPM1 gene with dilated cardiomyopathy: A case-control study
title_full Association of single nucleotide polymorphisms in the 3′UTR region of TPM1 gene with dilated cardiomyopathy: A case-control study
title_fullStr Association of single nucleotide polymorphisms in the 3′UTR region of TPM1 gene with dilated cardiomyopathy: A case-control study
title_full_unstemmed Association of single nucleotide polymorphisms in the 3′UTR region of TPM1 gene with dilated cardiomyopathy: A case-control study
title_short Association of single nucleotide polymorphisms in the 3′UTR region of TPM1 gene with dilated cardiomyopathy: A case-control study
title_sort association of single nucleotide polymorphisms in the 3′utr region of tpm1 gene with dilated cardiomyopathy: a case-control study
topic 3400
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6946328/
https://www.ncbi.nlm.nih.gov/pubmed/31689804
http://dx.doi.org/10.1097/MD.0000000000017710
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