Cargando…

A practical model for the identification of congenital cataracts using machine learning

BACKGROUND: Approximately 1 in 33 newborns is affected by congenital anomalies worldwide. We aimed to develop a practical model for identifying infants with a high risk of congenital cataracts (CCs), which is the leading cause of avoidable childhood blindness. METHODS: This case-control study was pe...

Descripción completa

Detalles Bibliográficos
Autores principales: Lin, Duoru, Chen, Jingjing, Lin, Zhuoling, Li, Xiaoyan, Zhang, Kai, Wu, Xiaohang, Liu, Zhenzhen, Huang, Jialing, Li, Jing, Zhu, Yi, Chen, Chuan, Zhao, Lanqin, Xiang, Yifan, Guo, Chong, Wang, Liming, Liu, Yizhi, Chen, Weirong, Lin, Haotian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6948173/
https://www.ncbi.nlm.nih.gov/pubmed/31901869
http://dx.doi.org/10.1016/j.ebiom.2019.102621
_version_ 1783485697755185152
author Lin, Duoru
Chen, Jingjing
Lin, Zhuoling
Li, Xiaoyan
Zhang, Kai
Wu, Xiaohang
Liu, Zhenzhen
Huang, Jialing
Li, Jing
Zhu, Yi
Chen, Chuan
Zhao, Lanqin
Xiang, Yifan
Guo, Chong
Wang, Liming
Liu, Yizhi
Chen, Weirong
Lin, Haotian
author_facet Lin, Duoru
Chen, Jingjing
Lin, Zhuoling
Li, Xiaoyan
Zhang, Kai
Wu, Xiaohang
Liu, Zhenzhen
Huang, Jialing
Li, Jing
Zhu, Yi
Chen, Chuan
Zhao, Lanqin
Xiang, Yifan
Guo, Chong
Wang, Liming
Liu, Yizhi
Chen, Weirong
Lin, Haotian
author_sort Lin, Duoru
collection PubMed
description BACKGROUND: Approximately 1 in 33 newborns is affected by congenital anomalies worldwide. We aimed to develop a practical model for identifying infants with a high risk of congenital cataracts (CCs), which is the leading cause of avoidable childhood blindness. METHODS: This case-control study was performed in the Zhongshan Ophthalmic Center and involved 2005 subjects, including 1274 children with CCs and 731 healthy controls. The CC identification models were established based on birth conditions, family medical history, and family environmental factors using the random forest (RF) and adaptive boosting methods (trained by 1129 CC cases and 609 healthy controls), which were tested by internal 4-fold cross-validation and external validation (145 CC cases and 122 healthy controls). The models were also tested using 4 datasets with gradually reduced proportions of CC patients (bilateral cases) to validate their performance in an approximate simulation of a clinical environment with a relatively low disease prevalence. FINDINGS: The CC identification models showed high discrimination in both the 4-fold cross validation (area under the curve (AUC)=0.91 [95% confidence interval: 0.88–0.94] in bilateral cases; 0.82 [0.77–0.89] in unilateral cases) and external validation (AUC=0.93±0.05 in bilateral cases; 0.86±0.01 in unilateral cases), and achieved stable performance in the clinical tests (AUC=0.94–0.96 in the four subgroups by RF). Furthermore, family history of CC, low parental education level, and comorbidity were identified as the top three most relevant factors to both bilateral and unilateral CC diagnosis. INTERPRETATION: Our CC identification models can accurately discriminate CC patients from healthy children and have the potential to serve as a complementary screening procedure, especially in undeveloped and remote areas.
format Online
Article
Text
id pubmed-6948173
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-69481732020-01-09 A practical model for the identification of congenital cataracts using machine learning Lin, Duoru Chen, Jingjing Lin, Zhuoling Li, Xiaoyan Zhang, Kai Wu, Xiaohang Liu, Zhenzhen Huang, Jialing Li, Jing Zhu, Yi Chen, Chuan Zhao, Lanqin Xiang, Yifan Guo, Chong Wang, Liming Liu, Yizhi Chen, Weirong Lin, Haotian EBioMedicine Research paper BACKGROUND: Approximately 1 in 33 newborns is affected by congenital anomalies worldwide. We aimed to develop a practical model for identifying infants with a high risk of congenital cataracts (CCs), which is the leading cause of avoidable childhood blindness. METHODS: This case-control study was performed in the Zhongshan Ophthalmic Center and involved 2005 subjects, including 1274 children with CCs and 731 healthy controls. The CC identification models were established based on birth conditions, family medical history, and family environmental factors using the random forest (RF) and adaptive boosting methods (trained by 1129 CC cases and 609 healthy controls), which were tested by internal 4-fold cross-validation and external validation (145 CC cases and 122 healthy controls). The models were also tested using 4 datasets with gradually reduced proportions of CC patients (bilateral cases) to validate their performance in an approximate simulation of a clinical environment with a relatively low disease prevalence. FINDINGS: The CC identification models showed high discrimination in both the 4-fold cross validation (area under the curve (AUC)=0.91 [95% confidence interval: 0.88–0.94] in bilateral cases; 0.82 [0.77–0.89] in unilateral cases) and external validation (AUC=0.93±0.05 in bilateral cases; 0.86±0.01 in unilateral cases), and achieved stable performance in the clinical tests (AUC=0.94–0.96 in the four subgroups by RF). Furthermore, family history of CC, low parental education level, and comorbidity were identified as the top three most relevant factors to both bilateral and unilateral CC diagnosis. INTERPRETATION: Our CC identification models can accurately discriminate CC patients from healthy children and have the potential to serve as a complementary screening procedure, especially in undeveloped and remote areas. Elsevier 2020-01-03 /pmc/articles/PMC6948173/ /pubmed/31901869 http://dx.doi.org/10.1016/j.ebiom.2019.102621 Text en © 2019 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research paper
Lin, Duoru
Chen, Jingjing
Lin, Zhuoling
Li, Xiaoyan
Zhang, Kai
Wu, Xiaohang
Liu, Zhenzhen
Huang, Jialing
Li, Jing
Zhu, Yi
Chen, Chuan
Zhao, Lanqin
Xiang, Yifan
Guo, Chong
Wang, Liming
Liu, Yizhi
Chen, Weirong
Lin, Haotian
A practical model for the identification of congenital cataracts using machine learning
title A practical model for the identification of congenital cataracts using machine learning
title_full A practical model for the identification of congenital cataracts using machine learning
title_fullStr A practical model for the identification of congenital cataracts using machine learning
title_full_unstemmed A practical model for the identification of congenital cataracts using machine learning
title_short A practical model for the identification of congenital cataracts using machine learning
title_sort practical model for the identification of congenital cataracts using machine learning
topic Research paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6948173/
https://www.ncbi.nlm.nih.gov/pubmed/31901869
http://dx.doi.org/10.1016/j.ebiom.2019.102621
work_keys_str_mv AT linduoru apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT chenjingjing apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT linzhuoling apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT lixiaoyan apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT zhangkai apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT wuxiaohang apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT liuzhenzhen apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT huangjialing apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT lijing apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT zhuyi apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT chenchuan apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT zhaolanqin apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT xiangyifan apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT guochong apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT wangliming apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT liuyizhi apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT chenweirong apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT linhaotian apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT linduoru practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT chenjingjing practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT linzhuoling practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT lixiaoyan practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT zhangkai practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT wuxiaohang practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT liuzhenzhen practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT huangjialing practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT lijing practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT zhuyi practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT chenchuan practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT zhaolanqin practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT xiangyifan practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT guochong practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT wangliming practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT liuyizhi practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT chenweirong practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning
AT linhaotian practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning