Cargando…
A practical model for the identification of congenital cataracts using machine learning
BACKGROUND: Approximately 1 in 33 newborns is affected by congenital anomalies worldwide. We aimed to develop a practical model for identifying infants with a high risk of congenital cataracts (CCs), which is the leading cause of avoidable childhood blindness. METHODS: This case-control study was pe...
Autores principales: | , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6948173/ https://www.ncbi.nlm.nih.gov/pubmed/31901869 http://dx.doi.org/10.1016/j.ebiom.2019.102621 |
_version_ | 1783485697755185152 |
---|---|
author | Lin, Duoru Chen, Jingjing Lin, Zhuoling Li, Xiaoyan Zhang, Kai Wu, Xiaohang Liu, Zhenzhen Huang, Jialing Li, Jing Zhu, Yi Chen, Chuan Zhao, Lanqin Xiang, Yifan Guo, Chong Wang, Liming Liu, Yizhi Chen, Weirong Lin, Haotian |
author_facet | Lin, Duoru Chen, Jingjing Lin, Zhuoling Li, Xiaoyan Zhang, Kai Wu, Xiaohang Liu, Zhenzhen Huang, Jialing Li, Jing Zhu, Yi Chen, Chuan Zhao, Lanqin Xiang, Yifan Guo, Chong Wang, Liming Liu, Yizhi Chen, Weirong Lin, Haotian |
author_sort | Lin, Duoru |
collection | PubMed |
description | BACKGROUND: Approximately 1 in 33 newborns is affected by congenital anomalies worldwide. We aimed to develop a practical model for identifying infants with a high risk of congenital cataracts (CCs), which is the leading cause of avoidable childhood blindness. METHODS: This case-control study was performed in the Zhongshan Ophthalmic Center and involved 2005 subjects, including 1274 children with CCs and 731 healthy controls. The CC identification models were established based on birth conditions, family medical history, and family environmental factors using the random forest (RF) and adaptive boosting methods (trained by 1129 CC cases and 609 healthy controls), which were tested by internal 4-fold cross-validation and external validation (145 CC cases and 122 healthy controls). The models were also tested using 4 datasets with gradually reduced proportions of CC patients (bilateral cases) to validate their performance in an approximate simulation of a clinical environment with a relatively low disease prevalence. FINDINGS: The CC identification models showed high discrimination in both the 4-fold cross validation (area under the curve (AUC)=0.91 [95% confidence interval: 0.88–0.94] in bilateral cases; 0.82 [0.77–0.89] in unilateral cases) and external validation (AUC=0.93±0.05 in bilateral cases; 0.86±0.01 in unilateral cases), and achieved stable performance in the clinical tests (AUC=0.94–0.96 in the four subgroups by RF). Furthermore, family history of CC, low parental education level, and comorbidity were identified as the top three most relevant factors to both bilateral and unilateral CC diagnosis. INTERPRETATION: Our CC identification models can accurately discriminate CC patients from healthy children and have the potential to serve as a complementary screening procedure, especially in undeveloped and remote areas. |
format | Online Article Text |
id | pubmed-6948173 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-69481732020-01-09 A practical model for the identification of congenital cataracts using machine learning Lin, Duoru Chen, Jingjing Lin, Zhuoling Li, Xiaoyan Zhang, Kai Wu, Xiaohang Liu, Zhenzhen Huang, Jialing Li, Jing Zhu, Yi Chen, Chuan Zhao, Lanqin Xiang, Yifan Guo, Chong Wang, Liming Liu, Yizhi Chen, Weirong Lin, Haotian EBioMedicine Research paper BACKGROUND: Approximately 1 in 33 newborns is affected by congenital anomalies worldwide. We aimed to develop a practical model for identifying infants with a high risk of congenital cataracts (CCs), which is the leading cause of avoidable childhood blindness. METHODS: This case-control study was performed in the Zhongshan Ophthalmic Center and involved 2005 subjects, including 1274 children with CCs and 731 healthy controls. The CC identification models were established based on birth conditions, family medical history, and family environmental factors using the random forest (RF) and adaptive boosting methods (trained by 1129 CC cases and 609 healthy controls), which were tested by internal 4-fold cross-validation and external validation (145 CC cases and 122 healthy controls). The models were also tested using 4 datasets with gradually reduced proportions of CC patients (bilateral cases) to validate their performance in an approximate simulation of a clinical environment with a relatively low disease prevalence. FINDINGS: The CC identification models showed high discrimination in both the 4-fold cross validation (area under the curve (AUC)=0.91 [95% confidence interval: 0.88–0.94] in bilateral cases; 0.82 [0.77–0.89] in unilateral cases) and external validation (AUC=0.93±0.05 in bilateral cases; 0.86±0.01 in unilateral cases), and achieved stable performance in the clinical tests (AUC=0.94–0.96 in the four subgroups by RF). Furthermore, family history of CC, low parental education level, and comorbidity were identified as the top three most relevant factors to both bilateral and unilateral CC diagnosis. INTERPRETATION: Our CC identification models can accurately discriminate CC patients from healthy children and have the potential to serve as a complementary screening procedure, especially in undeveloped and remote areas. Elsevier 2020-01-03 /pmc/articles/PMC6948173/ /pubmed/31901869 http://dx.doi.org/10.1016/j.ebiom.2019.102621 Text en © 2019 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research paper Lin, Duoru Chen, Jingjing Lin, Zhuoling Li, Xiaoyan Zhang, Kai Wu, Xiaohang Liu, Zhenzhen Huang, Jialing Li, Jing Zhu, Yi Chen, Chuan Zhao, Lanqin Xiang, Yifan Guo, Chong Wang, Liming Liu, Yizhi Chen, Weirong Lin, Haotian A practical model for the identification of congenital cataracts using machine learning |
title | A practical model for the identification of congenital cataracts using machine learning |
title_full | A practical model for the identification of congenital cataracts using machine learning |
title_fullStr | A practical model for the identification of congenital cataracts using machine learning |
title_full_unstemmed | A practical model for the identification of congenital cataracts using machine learning |
title_short | A practical model for the identification of congenital cataracts using machine learning |
title_sort | practical model for the identification of congenital cataracts using machine learning |
topic | Research paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6948173/ https://www.ncbi.nlm.nih.gov/pubmed/31901869 http://dx.doi.org/10.1016/j.ebiom.2019.102621 |
work_keys_str_mv | AT linduoru apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT chenjingjing apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT linzhuoling apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT lixiaoyan apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT zhangkai apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT wuxiaohang apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT liuzhenzhen apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT huangjialing apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT lijing apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT zhuyi apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT chenchuan apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT zhaolanqin apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT xiangyifan apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT guochong apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT wangliming apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT liuyizhi apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT chenweirong apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT linhaotian apracticalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT linduoru practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT chenjingjing practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT linzhuoling practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT lixiaoyan practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT zhangkai practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT wuxiaohang practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT liuzhenzhen practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT huangjialing practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT lijing practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT zhuyi practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT chenchuan practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT zhaolanqin practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT xiangyifan practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT guochong practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT wangliming practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT liuyizhi practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT chenweirong practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning AT linhaotian practicalmodelfortheidentificationofcongenitalcataractsusingmachinelearning |