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Stable polyp-scene classification via subsampling and residual learning from an imbalanced large dataset

This Letter presents a stable polyp-scene classification method with low false positive (FP) detection. Precise automated polyp detection during colonoscopies is essential for preventing colon-cancer deaths. There is, therefore, a demand for a computer-assisted diagnosis (CAD) system for colonoscopi...

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Autores principales: Itoh, Hayato, Roth, Holger, Oda, Masahiro, Misawa, Masashi, Mori, Yuichi, Kudo, Shin-Ei, Mori, Kensaku
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Institution of Engineering and Technology 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6952261/
https://www.ncbi.nlm.nih.gov/pubmed/32038864
http://dx.doi.org/10.1049/htl.2019.0079
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author Itoh, Hayato
Roth, Holger
Oda, Masahiro
Misawa, Masashi
Mori, Yuichi
Kudo, Shin-Ei
Mori, Kensaku
author_facet Itoh, Hayato
Roth, Holger
Oda, Masahiro
Misawa, Masashi
Mori, Yuichi
Kudo, Shin-Ei
Mori, Kensaku
author_sort Itoh, Hayato
collection PubMed
description This Letter presents a stable polyp-scene classification method with low false positive (FP) detection. Precise automated polyp detection during colonoscopies is essential for preventing colon-cancer deaths. There is, therefore, a demand for a computer-assisted diagnosis (CAD) system for colonoscopies to assist colonoscopists. A high-performance CAD system with spatiotemporal feature extraction via a three-dimensional convolutional neural network (3D CNN) with a limited dataset achieved about 80% detection accuracy in actual colonoscopic videos. Consequently, further improvement of a 3D CNN with larger training data is feasible. However, the ratio between polyp and non-polyp scenes is quite imbalanced in a large colonoscopic video dataset. This imbalance leads to unstable polyp detection. To circumvent this, the authors propose an efficient and balanced learning technique for deep residual learning. The authors’ method randomly selects a subset of non-polyp scenes whose number is the same number of still images of polyp scenes at the beginning of each epoch of learning. Furthermore, they introduce post-processing for stable polyp-scene classification. This post-processing reduces the FPs that occur in the practical application of polyp-scene classification. They evaluate several residual networks with a large polyp-detection dataset consisting of 1027 colonoscopic videos. In the scene-level evaluation, their proposed method achieves stable polyp-scene classification with 0.86 sensitivity and 0.97 specificity.
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spelling pubmed-69522612020-02-07 Stable polyp-scene classification via subsampling and residual learning from an imbalanced large dataset Itoh, Hayato Roth, Holger Oda, Masahiro Misawa, Masashi Mori, Yuichi Kudo, Shin-Ei Mori, Kensaku Healthc Technol Lett Special Issue: Papers from the 13th Workshop on Augmented Environments for Computer Assisted Interventions This Letter presents a stable polyp-scene classification method with low false positive (FP) detection. Precise automated polyp detection during colonoscopies is essential for preventing colon-cancer deaths. There is, therefore, a demand for a computer-assisted diagnosis (CAD) system for colonoscopies to assist colonoscopists. A high-performance CAD system with spatiotemporal feature extraction via a three-dimensional convolutional neural network (3D CNN) with a limited dataset achieved about 80% detection accuracy in actual colonoscopic videos. Consequently, further improvement of a 3D CNN with larger training data is feasible. However, the ratio between polyp and non-polyp scenes is quite imbalanced in a large colonoscopic video dataset. This imbalance leads to unstable polyp detection. To circumvent this, the authors propose an efficient and balanced learning technique for deep residual learning. The authors’ method randomly selects a subset of non-polyp scenes whose number is the same number of still images of polyp scenes at the beginning of each epoch of learning. Furthermore, they introduce post-processing for stable polyp-scene classification. This post-processing reduces the FPs that occur in the practical application of polyp-scene classification. They evaluate several residual networks with a large polyp-detection dataset consisting of 1027 colonoscopic videos. In the scene-level evaluation, their proposed method achieves stable polyp-scene classification with 0.86 sensitivity and 0.97 specificity. The Institution of Engineering and Technology 2019-11-26 /pmc/articles/PMC6952261/ /pubmed/32038864 http://dx.doi.org/10.1049/htl.2019.0079 Text en http://creativecommons.org/licenses/by/3.0/ This is an open access article published by the IET under the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/)
spellingShingle Special Issue: Papers from the 13th Workshop on Augmented Environments for Computer Assisted Interventions
Itoh, Hayato
Roth, Holger
Oda, Masahiro
Misawa, Masashi
Mori, Yuichi
Kudo, Shin-Ei
Mori, Kensaku
Stable polyp-scene classification via subsampling and residual learning from an imbalanced large dataset
title Stable polyp-scene classification via subsampling and residual learning from an imbalanced large dataset
title_full Stable polyp-scene classification via subsampling and residual learning from an imbalanced large dataset
title_fullStr Stable polyp-scene classification via subsampling and residual learning from an imbalanced large dataset
title_full_unstemmed Stable polyp-scene classification via subsampling and residual learning from an imbalanced large dataset
title_short Stable polyp-scene classification via subsampling and residual learning from an imbalanced large dataset
title_sort stable polyp-scene classification via subsampling and residual learning from an imbalanced large dataset
topic Special Issue: Papers from the 13th Workshop on Augmented Environments for Computer Assisted Interventions
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6952261/
https://www.ncbi.nlm.nih.gov/pubmed/32038864
http://dx.doi.org/10.1049/htl.2019.0079
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