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Genome sequencing in persistently unsolved white matter disorders

Genetic white matter disorders have heterogeneous etiologies and overlapping clinical presentations. We performed a study of the diagnostic efficacy of genome sequencing in 41 unsolved cases with prior exome sequencing, resolving an additional 14 from an historical cohort (n = 191). Reanalysis in th...

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Autores principales: Helman, Guy, Lajoie, Bryan R., Crawford, Joanna, Takanohashi, Asako, Walkiewicz, Marzena, Dolzhenko, Egor, Gross, Andrew M., Gainullin, Vladimir G., Bent, Stephen J., Jenkinson, Emma M., Ferdinandusse, Sacha, Waterham, Hans R., Dorboz, Imen, Bertini, Enrico, Miyake, Noriko, Wolf, Nicole I., Abbink, Truus E. M., Kirwin, Susan M., Tan, Christina M., Hobson, Grace M., Guo, Long, Ikegawa, Shiro, Pizzino, Amy, Schmidt, Johanna L., Bernard, Genevieve, Schiffmann, Raphael, van der Knaap, Marjo S., Simons, Cas, Taft, Ryan J., Vanderver, Adeline
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6952322/
https://www.ncbi.nlm.nih.gov/pubmed/31912665
http://dx.doi.org/10.1002/acn3.50957
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author Helman, Guy
Lajoie, Bryan R.
Crawford, Joanna
Takanohashi, Asako
Walkiewicz, Marzena
Dolzhenko, Egor
Gross, Andrew M.
Gainullin, Vladimir G.
Bent, Stephen J.
Jenkinson, Emma M.
Ferdinandusse, Sacha
Waterham, Hans R.
Dorboz, Imen
Bertini, Enrico
Miyake, Noriko
Wolf, Nicole I.
Abbink, Truus E. M.
Kirwin, Susan M.
Tan, Christina M.
Hobson, Grace M.
Guo, Long
Ikegawa, Shiro
Pizzino, Amy
Schmidt, Johanna L.
Bernard, Genevieve
Schiffmann, Raphael
van der Knaap, Marjo S.
Simons, Cas
Taft, Ryan J.
Vanderver, Adeline
author_facet Helman, Guy
Lajoie, Bryan R.
Crawford, Joanna
Takanohashi, Asako
Walkiewicz, Marzena
Dolzhenko, Egor
Gross, Andrew M.
Gainullin, Vladimir G.
Bent, Stephen J.
Jenkinson, Emma M.
Ferdinandusse, Sacha
Waterham, Hans R.
Dorboz, Imen
Bertini, Enrico
Miyake, Noriko
Wolf, Nicole I.
Abbink, Truus E. M.
Kirwin, Susan M.
Tan, Christina M.
Hobson, Grace M.
Guo, Long
Ikegawa, Shiro
Pizzino, Amy
Schmidt, Johanna L.
Bernard, Genevieve
Schiffmann, Raphael
van der Knaap, Marjo S.
Simons, Cas
Taft, Ryan J.
Vanderver, Adeline
author_sort Helman, Guy
collection PubMed
description Genetic white matter disorders have heterogeneous etiologies and overlapping clinical presentations. We performed a study of the diagnostic efficacy of genome sequencing in 41 unsolved cases with prior exome sequencing, resolving an additional 14 from an historical cohort (n = 191). Reanalysis in the context of novel disease‐associated genes and improved variant curation and annotation resolved 64% of cases. The remaining diagnoses were directly attributable to genome sequencing, including cases with small and large copy number variants (CNVs) and variants in deep intronic and technically difficult regions. Genome sequencing, in combination with other methodologies, achieved a diagnostic yield of 85% in this retrospective cohort.
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spelling pubmed-69523222020-01-10 Genome sequencing in persistently unsolved white matter disorders Helman, Guy Lajoie, Bryan R. Crawford, Joanna Takanohashi, Asako Walkiewicz, Marzena Dolzhenko, Egor Gross, Andrew M. Gainullin, Vladimir G. Bent, Stephen J. Jenkinson, Emma M. Ferdinandusse, Sacha Waterham, Hans R. Dorboz, Imen Bertini, Enrico Miyake, Noriko Wolf, Nicole I. Abbink, Truus E. M. Kirwin, Susan M. Tan, Christina M. Hobson, Grace M. Guo, Long Ikegawa, Shiro Pizzino, Amy Schmidt, Johanna L. Bernard, Genevieve Schiffmann, Raphael van der Knaap, Marjo S. Simons, Cas Taft, Ryan J. Vanderver, Adeline Ann Clin Transl Neurol Brief Communications Genetic white matter disorders have heterogeneous etiologies and overlapping clinical presentations. We performed a study of the diagnostic efficacy of genome sequencing in 41 unsolved cases with prior exome sequencing, resolving an additional 14 from an historical cohort (n = 191). Reanalysis in the context of novel disease‐associated genes and improved variant curation and annotation resolved 64% of cases. The remaining diagnoses were directly attributable to genome sequencing, including cases with small and large copy number variants (CNVs) and variants in deep intronic and technically difficult regions. Genome sequencing, in combination with other methodologies, achieved a diagnostic yield of 85% in this retrospective cohort. John Wiley and Sons Inc. 2020-01-07 /pmc/articles/PMC6952322/ /pubmed/31912665 http://dx.doi.org/10.1002/acn3.50957 Text en © 2020 The Authors. Annals of Clinical and Translational Neurology published by Wiley Periodicals, Inc on behalf of American Neurological Association. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Brief Communications
Helman, Guy
Lajoie, Bryan R.
Crawford, Joanna
Takanohashi, Asako
Walkiewicz, Marzena
Dolzhenko, Egor
Gross, Andrew M.
Gainullin, Vladimir G.
Bent, Stephen J.
Jenkinson, Emma M.
Ferdinandusse, Sacha
Waterham, Hans R.
Dorboz, Imen
Bertini, Enrico
Miyake, Noriko
Wolf, Nicole I.
Abbink, Truus E. M.
Kirwin, Susan M.
Tan, Christina M.
Hobson, Grace M.
Guo, Long
Ikegawa, Shiro
Pizzino, Amy
Schmidt, Johanna L.
Bernard, Genevieve
Schiffmann, Raphael
van der Knaap, Marjo S.
Simons, Cas
Taft, Ryan J.
Vanderver, Adeline
Genome sequencing in persistently unsolved white matter disorders
title Genome sequencing in persistently unsolved white matter disorders
title_full Genome sequencing in persistently unsolved white matter disorders
title_fullStr Genome sequencing in persistently unsolved white matter disorders
title_full_unstemmed Genome sequencing in persistently unsolved white matter disorders
title_short Genome sequencing in persistently unsolved white matter disorders
title_sort genome sequencing in persistently unsolved white matter disorders
topic Brief Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6952322/
https://www.ncbi.nlm.nih.gov/pubmed/31912665
http://dx.doi.org/10.1002/acn3.50957
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