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Facile synthesis of hydrophilic magnetic graphene nanocomposites via dopamine self-polymerization and Michael addition for selective enrichment of N-linked glycopeptides
The development of methods to effectively capture N-glycopeptides from the complex biological samples is crucial to N-glycoproteome profiling. Herein, the hydrophilic chitosan–functionalized magnetic graphene nanocomposites (denoted as Fe(3)O(4)-GO@PDA-Chitosan) were designed and synthesized via a s...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6952460/ https://www.ncbi.nlm.nih.gov/pubmed/31919391 http://dx.doi.org/10.1038/s41598-019-56944-4 |
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author | Bi, Changfen Yuan, Ye Tu, Yuran Wu, Jiahui Liang, Yulu Li, Yiliang He, Xiwen Chen, Langxing Zhang, Yukui |
author_facet | Bi, Changfen Yuan, Ye Tu, Yuran Wu, Jiahui Liang, Yulu Li, Yiliang He, Xiwen Chen, Langxing Zhang, Yukui |
author_sort | Bi, Changfen |
collection | PubMed |
description | The development of methods to effectively capture N-glycopeptides from the complex biological samples is crucial to N-glycoproteome profiling. Herein, the hydrophilic chitosan–functionalized magnetic graphene nanocomposites (denoted as Fe(3)O(4)-GO@PDA-Chitosan) were designed and synthesized via a simple two-step modification (dopamine self-polymerization and Michael addition). The Fe(3)O(4)-GO@PDA-Chitosan nanocomposites exhibited good performances with low detection limit (0.4 fmol·μL(−1)), good selectivity (mixture of bovine serum albumin and horseradish peroxidase tryptic digests at a molar ration of 10:1), good repeatability (4 times), high binding capacity (75 mg·g(−1)). Moreover, Fe(3)O(4)-GO@PDA-Chitosan nanocomposites were further utilized to selectively enrich glycopeptides from human renal mesangial cell (HRMC, 200 μg) tryptic digest, and 393 N-linked glycopeptides, representing 195 different glycoproteins and 458 glycosylation sites were identified. This study provides a feasible strategy for the surface functionalized novel materials for isolation and enrichment of N-glycopeptides. |
format | Online Article Text |
id | pubmed-6952460 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-69524602020-01-14 Facile synthesis of hydrophilic magnetic graphene nanocomposites via dopamine self-polymerization and Michael addition for selective enrichment of N-linked glycopeptides Bi, Changfen Yuan, Ye Tu, Yuran Wu, Jiahui Liang, Yulu Li, Yiliang He, Xiwen Chen, Langxing Zhang, Yukui Sci Rep Article The development of methods to effectively capture N-glycopeptides from the complex biological samples is crucial to N-glycoproteome profiling. Herein, the hydrophilic chitosan–functionalized magnetic graphene nanocomposites (denoted as Fe(3)O(4)-GO@PDA-Chitosan) were designed and synthesized via a simple two-step modification (dopamine self-polymerization and Michael addition). The Fe(3)O(4)-GO@PDA-Chitosan nanocomposites exhibited good performances with low detection limit (0.4 fmol·μL(−1)), good selectivity (mixture of bovine serum albumin and horseradish peroxidase tryptic digests at a molar ration of 10:1), good repeatability (4 times), high binding capacity (75 mg·g(−1)). Moreover, Fe(3)O(4)-GO@PDA-Chitosan nanocomposites were further utilized to selectively enrich glycopeptides from human renal mesangial cell (HRMC, 200 μg) tryptic digest, and 393 N-linked glycopeptides, representing 195 different glycoproteins and 458 glycosylation sites were identified. This study provides a feasible strategy for the surface functionalized novel materials for isolation and enrichment of N-glycopeptides. Nature Publishing Group UK 2020-01-09 /pmc/articles/PMC6952460/ /pubmed/31919391 http://dx.doi.org/10.1038/s41598-019-56944-4 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Bi, Changfen Yuan, Ye Tu, Yuran Wu, Jiahui Liang, Yulu Li, Yiliang He, Xiwen Chen, Langxing Zhang, Yukui Facile synthesis of hydrophilic magnetic graphene nanocomposites via dopamine self-polymerization and Michael addition for selective enrichment of N-linked glycopeptides |
title | Facile synthesis of hydrophilic magnetic graphene nanocomposites via dopamine self-polymerization and Michael addition for selective enrichment of N-linked glycopeptides |
title_full | Facile synthesis of hydrophilic magnetic graphene nanocomposites via dopamine self-polymerization and Michael addition for selective enrichment of N-linked glycopeptides |
title_fullStr | Facile synthesis of hydrophilic magnetic graphene nanocomposites via dopamine self-polymerization and Michael addition for selective enrichment of N-linked glycopeptides |
title_full_unstemmed | Facile synthesis of hydrophilic magnetic graphene nanocomposites via dopamine self-polymerization and Michael addition for selective enrichment of N-linked glycopeptides |
title_short | Facile synthesis of hydrophilic magnetic graphene nanocomposites via dopamine self-polymerization and Michael addition for selective enrichment of N-linked glycopeptides |
title_sort | facile synthesis of hydrophilic magnetic graphene nanocomposites via dopamine self-polymerization and michael addition for selective enrichment of n-linked glycopeptides |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6952460/ https://www.ncbi.nlm.nih.gov/pubmed/31919391 http://dx.doi.org/10.1038/s41598-019-56944-4 |
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