Draft Genome Sequences of Strains TAV3 and TAV4 (Verrucomicrobia: Opitutaceae), Isolated from a Wood-Feeding Termite, and In Silico Analysis of Their Polysaccharide-Degrading Enzymes

Here, we report the high-quality draft genome sequences of Opitutaceae sp. strains TAV3 and TAV4, which were isolated from the hindgut of the wood-feeding termite Reticulitermes flavipes. Using a combination of Illumina and PacBio sequencing, we constructed nearly complete assemblies totaling 5.84 a...

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Autores principales: Kotak, Malini, Lin, Jonathan Y., Isanapong, Jantiya, Rodrigues, Jorge L. M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2020
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6952651/
https://www.ncbi.nlm.nih.gov/pubmed/31919165
http://dx.doi.org/10.1128/MRA.01192-19
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author Kotak, Malini
Lin, Jonathan Y.
Isanapong, Jantiya
Rodrigues, Jorge L. M.
author_facet Kotak, Malini
Lin, Jonathan Y.
Isanapong, Jantiya
Rodrigues, Jorge L. M.
author_sort Kotak, Malini
collection PubMed
description Here, we report the high-quality draft genome sequences of Opitutaceae sp. strains TAV3 and TAV4, which were isolated from the hindgut of the wood-feeding termite Reticulitermes flavipes. Using a combination of Illumina and PacBio sequencing, we constructed nearly complete assemblies totaling 5.84 and 5.91 Mbp in length for strains TAV3 and TAV4, respectively. In addition, we report an in silico analysis of potential lignocellulose-digesting enzymes present in these strains.
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spelling pubmed-69526512020-01-16 Draft Genome Sequences of Strains TAV3 and TAV4 (Verrucomicrobia: Opitutaceae), Isolated from a Wood-Feeding Termite, and In Silico Analysis of Their Polysaccharide-Degrading Enzymes Kotak, Malini Lin, Jonathan Y. Isanapong, Jantiya Rodrigues, Jorge L. M. Microbiol Resour Announc Genome Sequences Here, we report the high-quality draft genome sequences of Opitutaceae sp. strains TAV3 and TAV4, which were isolated from the hindgut of the wood-feeding termite Reticulitermes flavipes. Using a combination of Illumina and PacBio sequencing, we constructed nearly complete assemblies totaling 5.84 and 5.91 Mbp in length for strains TAV3 and TAV4, respectively. In addition, we report an in silico analysis of potential lignocellulose-digesting enzymes present in these strains. American Society for Microbiology 2020-01-09 /pmc/articles/PMC6952651/ /pubmed/31919165 http://dx.doi.org/10.1128/MRA.01192-19 Text en Copyright © 2020 Kotak et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Kotak, Malini
Lin, Jonathan Y.
Isanapong, Jantiya
Rodrigues, Jorge L. M.
Draft Genome Sequences of Strains TAV3 and TAV4 (Verrucomicrobia: Opitutaceae), Isolated from a Wood-Feeding Termite, and In Silico Analysis of Their Polysaccharide-Degrading Enzymes
title Draft Genome Sequences of Strains TAV3 and TAV4 (Verrucomicrobia: Opitutaceae), Isolated from a Wood-Feeding Termite, and In Silico Analysis of Their Polysaccharide-Degrading Enzymes
title_full Draft Genome Sequences of Strains TAV3 and TAV4 (Verrucomicrobia: Opitutaceae), Isolated from a Wood-Feeding Termite, and In Silico Analysis of Their Polysaccharide-Degrading Enzymes
title_fullStr Draft Genome Sequences of Strains TAV3 and TAV4 (Verrucomicrobia: Opitutaceae), Isolated from a Wood-Feeding Termite, and In Silico Analysis of Their Polysaccharide-Degrading Enzymes
title_full_unstemmed Draft Genome Sequences of Strains TAV3 and TAV4 (Verrucomicrobia: Opitutaceae), Isolated from a Wood-Feeding Termite, and In Silico Analysis of Their Polysaccharide-Degrading Enzymes
title_short Draft Genome Sequences of Strains TAV3 and TAV4 (Verrucomicrobia: Opitutaceae), Isolated from a Wood-Feeding Termite, and In Silico Analysis of Their Polysaccharide-Degrading Enzymes
title_sort draft genome sequences of strains tav3 and tav4 (verrucomicrobia: opitutaceae), isolated from a wood-feeding termite, and in silico analysis of their polysaccharide-degrading enzymes
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6952651/
https://www.ncbi.nlm.nih.gov/pubmed/31919165
http://dx.doi.org/10.1128/MRA.01192-19
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