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Diagnosis of Bovine Respiratory Disease in feedlot cattle using blood (1)H NMR metabolomics
Current diagnosis methods for Bovine Respiratory Disease (BRD) in feedlots have a low diagnostic accuracy. The current study aimed to search for blood biomarkers of BRD using (1)H NMR metabolomics and determine their accuracy in diagnosing BRD. Animals with visual signs of BRD (n = 149) and visually...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6954258/ https://www.ncbi.nlm.nih.gov/pubmed/31924818 http://dx.doi.org/10.1038/s41598-019-56809-w |
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author | Blakebrough-Hall, C. Dona, A. D’occhio, M. J. McMeniman, J. González, L. A |
author_facet | Blakebrough-Hall, C. Dona, A. D’occhio, M. J. McMeniman, J. González, L. A |
author_sort | Blakebrough-Hall, C. |
collection | PubMed |
description | Current diagnosis methods for Bovine Respiratory Disease (BRD) in feedlots have a low diagnostic accuracy. The current study aimed to search for blood biomarkers of BRD using (1)H NMR metabolomics and determine their accuracy in diagnosing BRD. Animals with visual signs of BRD (n = 149) and visually healthy (non-BRD; n = 148) were sampled for blood metabolomics analysis. Lung lesions indicative of BRD were scored at slaughter. Non-targeted (1)H NMR metabolomics was used to develop predictive algorithms for disease classification using classification and regression trees. In the absence of a gold standard for BRD diagnosis, six reference diagnosis methods were used to define an animal as BRD or non-BRD. Sensitivity (Se) and specificity (Sp) were used to estimate diagnostic accuracy (Acc). Blood metabolomics demonstrated a high accuracy at diagnosing BRD when using visual signs of BRD (Acc = 0.85), however was less accurate at diagnosing BRD using rectal temperature (Acc = 0.65), lung auscultation score (Acc = 0.61) and lung lesions at slaughter as reference diagnosis methods (Acc = 0.71). Phenylalanine, lactate, hydroxybutyrate, tyrosine, citrate and leucine were identified as metabolites of importance in classifying animals as BRD or non-BRD. The blood metabolome classified BRD and non-BRD animals with high accuracy and shows potential for use as a BRD diagnosis tool. |
format | Online Article Text |
id | pubmed-6954258 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-69542582020-01-15 Diagnosis of Bovine Respiratory Disease in feedlot cattle using blood (1)H NMR metabolomics Blakebrough-Hall, C. Dona, A. D’occhio, M. J. McMeniman, J. González, L. A Sci Rep Article Current diagnosis methods for Bovine Respiratory Disease (BRD) in feedlots have a low diagnostic accuracy. The current study aimed to search for blood biomarkers of BRD using (1)H NMR metabolomics and determine their accuracy in diagnosing BRD. Animals with visual signs of BRD (n = 149) and visually healthy (non-BRD; n = 148) were sampled for blood metabolomics analysis. Lung lesions indicative of BRD were scored at slaughter. Non-targeted (1)H NMR metabolomics was used to develop predictive algorithms for disease classification using classification and regression trees. In the absence of a gold standard for BRD diagnosis, six reference diagnosis methods were used to define an animal as BRD or non-BRD. Sensitivity (Se) and specificity (Sp) were used to estimate diagnostic accuracy (Acc). Blood metabolomics demonstrated a high accuracy at diagnosing BRD when using visual signs of BRD (Acc = 0.85), however was less accurate at diagnosing BRD using rectal temperature (Acc = 0.65), lung auscultation score (Acc = 0.61) and lung lesions at slaughter as reference diagnosis methods (Acc = 0.71). Phenylalanine, lactate, hydroxybutyrate, tyrosine, citrate and leucine were identified as metabolites of importance in classifying animals as BRD or non-BRD. The blood metabolome classified BRD and non-BRD animals with high accuracy and shows potential for use as a BRD diagnosis tool. Nature Publishing Group UK 2020-01-10 /pmc/articles/PMC6954258/ /pubmed/31924818 http://dx.doi.org/10.1038/s41598-019-56809-w Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Blakebrough-Hall, C. Dona, A. D’occhio, M. J. McMeniman, J. González, L. A Diagnosis of Bovine Respiratory Disease in feedlot cattle using blood (1)H NMR metabolomics |
title | Diagnosis of Bovine Respiratory Disease in feedlot cattle using blood (1)H NMR metabolomics |
title_full | Diagnosis of Bovine Respiratory Disease in feedlot cattle using blood (1)H NMR metabolomics |
title_fullStr | Diagnosis of Bovine Respiratory Disease in feedlot cattle using blood (1)H NMR metabolomics |
title_full_unstemmed | Diagnosis of Bovine Respiratory Disease in feedlot cattle using blood (1)H NMR metabolomics |
title_short | Diagnosis of Bovine Respiratory Disease in feedlot cattle using blood (1)H NMR metabolomics |
title_sort | diagnosis of bovine respiratory disease in feedlot cattle using blood (1)h nmr metabolomics |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6954258/ https://www.ncbi.nlm.nih.gov/pubmed/31924818 http://dx.doi.org/10.1038/s41598-019-56809-w |
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