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Coding-complete genome sequencing suggests that Newcastle disease virus challenge strain Herts’33 (IVMP) may represent a distinct genotype
We determined the genomic sequence of a Newcastle disease virus (NDV) line obtained directly from the first NDV isolate, named Herts’33. This strain shared ≤ 90% nucleotide sequence identity with the NDV sequences available in the GenBank database, and formed a distinct branch in a phylogenetic tree...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Vienna
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6954893/ https://www.ncbi.nlm.nih.gov/pubmed/31705209 http://dx.doi.org/10.1007/s00705-019-04441-4 |
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author | Fehér, Enikő Bálint, Ádám Marton, Szilvia Bali, Krisztina Belák, Sándor Bányai, Krisztián |
author_facet | Fehér, Enikő Bálint, Ádám Marton, Szilvia Bali, Krisztina Belák, Sándor Bányai, Krisztián |
author_sort | Fehér, Enikő |
collection | PubMed |
description | We determined the genomic sequence of a Newcastle disease virus (NDV) line obtained directly from the first NDV isolate, named Herts’33. This strain shared ≤ 90% nucleotide sequence identity with the NDV sequences available in the GenBank database, and formed a distinct branch in a phylogenetic tree. This branch may be considered to represent a separate NDV genotype. Our study indicates that investigation of the genomic sequences of old NDV strains that originated from the early outbreaks of Newcastle disease may alter the phylogenetic grouping of the NDV strains and provide data on the evolution of viral genomes over time. |
format | Online Article Text |
id | pubmed-6954893 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Springer Vienna |
record_format | MEDLINE/PubMed |
spelling | pubmed-69548932020-01-23 Coding-complete genome sequencing suggests that Newcastle disease virus challenge strain Herts’33 (IVMP) may represent a distinct genotype Fehér, Enikő Bálint, Ádám Marton, Szilvia Bali, Krisztina Belák, Sándor Bányai, Krisztián Arch Virol Annotated Sequence Record We determined the genomic sequence of a Newcastle disease virus (NDV) line obtained directly from the first NDV isolate, named Herts’33. This strain shared ≤ 90% nucleotide sequence identity with the NDV sequences available in the GenBank database, and formed a distinct branch in a phylogenetic tree. This branch may be considered to represent a separate NDV genotype. Our study indicates that investigation of the genomic sequences of old NDV strains that originated from the early outbreaks of Newcastle disease may alter the phylogenetic grouping of the NDV strains and provide data on the evolution of viral genomes over time. Springer Vienna 2019-11-08 2020 /pmc/articles/PMC6954893/ /pubmed/31705209 http://dx.doi.org/10.1007/s00705-019-04441-4 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Annotated Sequence Record Fehér, Enikő Bálint, Ádám Marton, Szilvia Bali, Krisztina Belák, Sándor Bányai, Krisztián Coding-complete genome sequencing suggests that Newcastle disease virus challenge strain Herts’33 (IVMP) may represent a distinct genotype |
title | Coding-complete genome sequencing suggests that Newcastle disease virus challenge strain Herts’33 (IVMP) may represent a distinct genotype |
title_full | Coding-complete genome sequencing suggests that Newcastle disease virus challenge strain Herts’33 (IVMP) may represent a distinct genotype |
title_fullStr | Coding-complete genome sequencing suggests that Newcastle disease virus challenge strain Herts’33 (IVMP) may represent a distinct genotype |
title_full_unstemmed | Coding-complete genome sequencing suggests that Newcastle disease virus challenge strain Herts’33 (IVMP) may represent a distinct genotype |
title_short | Coding-complete genome sequencing suggests that Newcastle disease virus challenge strain Herts’33 (IVMP) may represent a distinct genotype |
title_sort | coding-complete genome sequencing suggests that newcastle disease virus challenge strain herts’33 (ivmp) may represent a distinct genotype |
topic | Annotated Sequence Record |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6954893/ https://www.ncbi.nlm.nih.gov/pubmed/31705209 http://dx.doi.org/10.1007/s00705-019-04441-4 |
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