Cargando…

Comparative analysis of time-based and quadrat sampling in seasonal population dynamics of intermediate hosts of human schistosomes

BACKGROUND: Despite their importance for designing and evaluating schistosomiasis control trials, little attention in the literature has been dedicated to sampling protocols for the parasite’s snail intermediate hosts since their first development. We propose a comparative analysis of time-based and...

Descripción completa

Detalles Bibliográficos
Autores principales: Perez-Saez, Javier, Mande, Théophile, Zongo, Dramane, Rinaldo, Andrea
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6957212/
https://www.ncbi.nlm.nih.gov/pubmed/31860653
http://dx.doi.org/10.1371/journal.pntd.0007938
_version_ 1783487279062319104
author Perez-Saez, Javier
Mande, Théophile
Zongo, Dramane
Rinaldo, Andrea
author_facet Perez-Saez, Javier
Mande, Théophile
Zongo, Dramane
Rinaldo, Andrea
author_sort Perez-Saez, Javier
collection PubMed
description BACKGROUND: Despite their importance for designing and evaluating schistosomiasis control trials, little attention in the literature has been dedicated to sampling protocols for the parasite’s snail intermediate hosts since their first development. We propose a comparative analysis of time-based and quadrat sampling protocols to quantify the seasonal variations in the abundance of these aquatic snail species of medical importance. METHODOLOGY/PRINCIPAL FINDINGS: Snail populations were monitored during 42 consecutive months in three types of habitats (ephemeral pond, ephemeral river and permanent stream) in two sites covering different climatic zones in Burkina Faso. We employed both a widely used time-based protocol of 30min of systematic collection at a weekly interval, and a quadrat protocol of 8 replicates per sample at a monthly interval. The correspondence between the two protocols was evaluated using an ensemble of statistical models including linear and saturating-type functional forms as well as allowing for count zero-inflation. The quadrat protocol yielded on average a relative standard error of 40%, for a mean snail density of 16.7 snails/m(2) and index of dispersion of 1.51. Both protocols yielded similar seasonal patterns in snail abundance, confirming the asynchrony between permanent and ephemeral habitats with respect to the country’s seasonal rainfall patterns. Formal model comparison of the link between time vs. quadrat counts showed strong support of saturation for the latter and measurement zero-inflation, providing important evidence for the presence of density feedbacks in the snail’s population dynamics, as well as for spatial clustering. CONCLUSIONS/SIGNIFICANCE: In addition to the agreement with the time-based method, quadrat sampling provided insight into snail population dynamics and comparable density estimates across sites. The re-evaluation of these “traditional” sampling protocols, as well as the correspondence between their outputs, is of practical importance for the design and evaluation of schistosomiasis control trials.
format Online
Article
Text
id pubmed-6957212
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-69572122020-01-26 Comparative analysis of time-based and quadrat sampling in seasonal population dynamics of intermediate hosts of human schistosomes Perez-Saez, Javier Mande, Théophile Zongo, Dramane Rinaldo, Andrea PLoS Negl Trop Dis Research Article BACKGROUND: Despite their importance for designing and evaluating schistosomiasis control trials, little attention in the literature has been dedicated to sampling protocols for the parasite’s snail intermediate hosts since their first development. We propose a comparative analysis of time-based and quadrat sampling protocols to quantify the seasonal variations in the abundance of these aquatic snail species of medical importance. METHODOLOGY/PRINCIPAL FINDINGS: Snail populations were monitored during 42 consecutive months in three types of habitats (ephemeral pond, ephemeral river and permanent stream) in two sites covering different climatic zones in Burkina Faso. We employed both a widely used time-based protocol of 30min of systematic collection at a weekly interval, and a quadrat protocol of 8 replicates per sample at a monthly interval. The correspondence between the two protocols was evaluated using an ensemble of statistical models including linear and saturating-type functional forms as well as allowing for count zero-inflation. The quadrat protocol yielded on average a relative standard error of 40%, for a mean snail density of 16.7 snails/m(2) and index of dispersion of 1.51. Both protocols yielded similar seasonal patterns in snail abundance, confirming the asynchrony between permanent and ephemeral habitats with respect to the country’s seasonal rainfall patterns. Formal model comparison of the link between time vs. quadrat counts showed strong support of saturation for the latter and measurement zero-inflation, providing important evidence for the presence of density feedbacks in the snail’s population dynamics, as well as for spatial clustering. CONCLUSIONS/SIGNIFICANCE: In addition to the agreement with the time-based method, quadrat sampling provided insight into snail population dynamics and comparable density estimates across sites. The re-evaluation of these “traditional” sampling protocols, as well as the correspondence between their outputs, is of practical importance for the design and evaluation of schistosomiasis control trials. Public Library of Science 2019-12-20 /pmc/articles/PMC6957212/ /pubmed/31860653 http://dx.doi.org/10.1371/journal.pntd.0007938 Text en © 2019 Perez-Saez et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Perez-Saez, Javier
Mande, Théophile
Zongo, Dramane
Rinaldo, Andrea
Comparative analysis of time-based and quadrat sampling in seasonal population dynamics of intermediate hosts of human schistosomes
title Comparative analysis of time-based and quadrat sampling in seasonal population dynamics of intermediate hosts of human schistosomes
title_full Comparative analysis of time-based and quadrat sampling in seasonal population dynamics of intermediate hosts of human schistosomes
title_fullStr Comparative analysis of time-based and quadrat sampling in seasonal population dynamics of intermediate hosts of human schistosomes
title_full_unstemmed Comparative analysis of time-based and quadrat sampling in seasonal population dynamics of intermediate hosts of human schistosomes
title_short Comparative analysis of time-based and quadrat sampling in seasonal population dynamics of intermediate hosts of human schistosomes
title_sort comparative analysis of time-based and quadrat sampling in seasonal population dynamics of intermediate hosts of human schistosomes
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6957212/
https://www.ncbi.nlm.nih.gov/pubmed/31860653
http://dx.doi.org/10.1371/journal.pntd.0007938
work_keys_str_mv AT perezsaezjavier comparativeanalysisoftimebasedandquadratsamplinginseasonalpopulationdynamicsofintermediatehostsofhumanschistosomes
AT mandetheophile comparativeanalysisoftimebasedandquadratsamplinginseasonalpopulationdynamicsofintermediatehostsofhumanschistosomes
AT zongodramane comparativeanalysisoftimebasedandquadratsamplinginseasonalpopulationdynamicsofintermediatehostsofhumanschistosomes
AT rinaldoandrea comparativeanalysisoftimebasedandquadratsamplinginseasonalpopulationdynamicsofintermediatehostsofhumanschistosomes