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The somatic mutation landscape of Chinese Colorectal Cancer

Colorectal cancer (CRC) is the fifth leading cause of cancer-related death in China. The incidence of Chinese CRC has increased dramatically with the changes of dietary and lifestyle. However, the genetic landscape of Chinese colorectal cancer mutation is still poorly understood. In this study, we h...

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Autores principales: Ma, Rong, Jing, Changwen, Zhang, Yuan, Cao, Haixia, Liu, Siwen, Wang, Zhuo, Chen, Dan, Zhang, Junying, Wu, Yang, Wu, Jianzhong, Feng, Jifeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Ivyspring International Publisher 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6959081/
https://www.ncbi.nlm.nih.gov/pubmed/31956350
http://dx.doi.org/10.7150/jca.37017
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author Ma, Rong
Jing, Changwen
Zhang, Yuan
Cao, Haixia
Liu, Siwen
Wang, Zhuo
Chen, Dan
Zhang, Junying
Wu, Yang
Wu, Jianzhong
Feng, Jifeng
author_facet Ma, Rong
Jing, Changwen
Zhang, Yuan
Cao, Haixia
Liu, Siwen
Wang, Zhuo
Chen, Dan
Zhang, Junying
Wu, Yang
Wu, Jianzhong
Feng, Jifeng
author_sort Ma, Rong
collection PubMed
description Colorectal cancer (CRC) is the fifth leading cause of cancer-related death in China. The incidence of Chinese CRC has increased dramatically with the changes of dietary and lifestyle. However, the genetic landscape of Chinese colorectal cancer mutation is still poorly understood. In this study, we have performed whole exome-sequencing analysis of 63 CRC cases. We found that Chinese CRC were hypermutated, which were enriched in ECM-receptor interaction, antigen processing and presentation, and focal adhesion. Analysis with clinical characteristics indicated that the deficiency of CRC driver gene, FCGBP and NBPF1 conferred CRC development and was showed worse survival rates, which could be the novel regulators and, diagnostic and prognostic biomarkers for Chinese CRC. Taken together, the application of whole exome-sequencing unveiled previously unsuspected somatic mutation landscape in Chinese CRCs, which may expand the understanding of disease mechanisms and provide an alternative personalized treatment for Chinese CRC patients.
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spelling pubmed-69590812020-01-18 The somatic mutation landscape of Chinese Colorectal Cancer Ma, Rong Jing, Changwen Zhang, Yuan Cao, Haixia Liu, Siwen Wang, Zhuo Chen, Dan Zhang, Junying Wu, Yang Wu, Jianzhong Feng, Jifeng J Cancer Research Paper Colorectal cancer (CRC) is the fifth leading cause of cancer-related death in China. The incidence of Chinese CRC has increased dramatically with the changes of dietary and lifestyle. However, the genetic landscape of Chinese colorectal cancer mutation is still poorly understood. In this study, we have performed whole exome-sequencing analysis of 63 CRC cases. We found that Chinese CRC were hypermutated, which were enriched in ECM-receptor interaction, antigen processing and presentation, and focal adhesion. Analysis with clinical characteristics indicated that the deficiency of CRC driver gene, FCGBP and NBPF1 conferred CRC development and was showed worse survival rates, which could be the novel regulators and, diagnostic and prognostic biomarkers for Chinese CRC. Taken together, the application of whole exome-sequencing unveiled previously unsuspected somatic mutation landscape in Chinese CRCs, which may expand the understanding of disease mechanisms and provide an alternative personalized treatment for Chinese CRC patients. Ivyspring International Publisher 2020-01-01 /pmc/articles/PMC6959081/ /pubmed/31956350 http://dx.doi.org/10.7150/jca.37017 Text en © The author(s) This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/). See http://ivyspring.com/terms for full terms and conditions.
spellingShingle Research Paper
Ma, Rong
Jing, Changwen
Zhang, Yuan
Cao, Haixia
Liu, Siwen
Wang, Zhuo
Chen, Dan
Zhang, Junying
Wu, Yang
Wu, Jianzhong
Feng, Jifeng
The somatic mutation landscape of Chinese Colorectal Cancer
title The somatic mutation landscape of Chinese Colorectal Cancer
title_full The somatic mutation landscape of Chinese Colorectal Cancer
title_fullStr The somatic mutation landscape of Chinese Colorectal Cancer
title_full_unstemmed The somatic mutation landscape of Chinese Colorectal Cancer
title_short The somatic mutation landscape of Chinese Colorectal Cancer
title_sort somatic mutation landscape of chinese colorectal cancer
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6959081/
https://www.ncbi.nlm.nih.gov/pubmed/31956350
http://dx.doi.org/10.7150/jca.37017
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