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The somatic mutation landscape of Chinese Colorectal Cancer
Colorectal cancer (CRC) is the fifth leading cause of cancer-related death in China. The incidence of Chinese CRC has increased dramatically with the changes of dietary and lifestyle. However, the genetic landscape of Chinese colorectal cancer mutation is still poorly understood. In this study, we h...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Ivyspring International Publisher
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6959081/ https://www.ncbi.nlm.nih.gov/pubmed/31956350 http://dx.doi.org/10.7150/jca.37017 |
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author | Ma, Rong Jing, Changwen Zhang, Yuan Cao, Haixia Liu, Siwen Wang, Zhuo Chen, Dan Zhang, Junying Wu, Yang Wu, Jianzhong Feng, Jifeng |
author_facet | Ma, Rong Jing, Changwen Zhang, Yuan Cao, Haixia Liu, Siwen Wang, Zhuo Chen, Dan Zhang, Junying Wu, Yang Wu, Jianzhong Feng, Jifeng |
author_sort | Ma, Rong |
collection | PubMed |
description | Colorectal cancer (CRC) is the fifth leading cause of cancer-related death in China. The incidence of Chinese CRC has increased dramatically with the changes of dietary and lifestyle. However, the genetic landscape of Chinese colorectal cancer mutation is still poorly understood. In this study, we have performed whole exome-sequencing analysis of 63 CRC cases. We found that Chinese CRC were hypermutated, which were enriched in ECM-receptor interaction, antigen processing and presentation, and focal adhesion. Analysis with clinical characteristics indicated that the deficiency of CRC driver gene, FCGBP and NBPF1 conferred CRC development and was showed worse survival rates, which could be the novel regulators and, diagnostic and prognostic biomarkers for Chinese CRC. Taken together, the application of whole exome-sequencing unveiled previously unsuspected somatic mutation landscape in Chinese CRCs, which may expand the understanding of disease mechanisms and provide an alternative personalized treatment for Chinese CRC patients. |
format | Online Article Text |
id | pubmed-6959081 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Ivyspring International Publisher |
record_format | MEDLINE/PubMed |
spelling | pubmed-69590812020-01-18 The somatic mutation landscape of Chinese Colorectal Cancer Ma, Rong Jing, Changwen Zhang, Yuan Cao, Haixia Liu, Siwen Wang, Zhuo Chen, Dan Zhang, Junying Wu, Yang Wu, Jianzhong Feng, Jifeng J Cancer Research Paper Colorectal cancer (CRC) is the fifth leading cause of cancer-related death in China. The incidence of Chinese CRC has increased dramatically with the changes of dietary and lifestyle. However, the genetic landscape of Chinese colorectal cancer mutation is still poorly understood. In this study, we have performed whole exome-sequencing analysis of 63 CRC cases. We found that Chinese CRC were hypermutated, which were enriched in ECM-receptor interaction, antigen processing and presentation, and focal adhesion. Analysis with clinical characteristics indicated that the deficiency of CRC driver gene, FCGBP and NBPF1 conferred CRC development and was showed worse survival rates, which could be the novel regulators and, diagnostic and prognostic biomarkers for Chinese CRC. Taken together, the application of whole exome-sequencing unveiled previously unsuspected somatic mutation landscape in Chinese CRCs, which may expand the understanding of disease mechanisms and provide an alternative personalized treatment for Chinese CRC patients. Ivyspring International Publisher 2020-01-01 /pmc/articles/PMC6959081/ /pubmed/31956350 http://dx.doi.org/10.7150/jca.37017 Text en © The author(s) This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/). See http://ivyspring.com/terms for full terms and conditions. |
spellingShingle | Research Paper Ma, Rong Jing, Changwen Zhang, Yuan Cao, Haixia Liu, Siwen Wang, Zhuo Chen, Dan Zhang, Junying Wu, Yang Wu, Jianzhong Feng, Jifeng The somatic mutation landscape of Chinese Colorectal Cancer |
title | The somatic mutation landscape of Chinese Colorectal Cancer |
title_full | The somatic mutation landscape of Chinese Colorectal Cancer |
title_fullStr | The somatic mutation landscape of Chinese Colorectal Cancer |
title_full_unstemmed | The somatic mutation landscape of Chinese Colorectal Cancer |
title_short | The somatic mutation landscape of Chinese Colorectal Cancer |
title_sort | somatic mutation landscape of chinese colorectal cancer |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6959081/ https://www.ncbi.nlm.nih.gov/pubmed/31956350 http://dx.doi.org/10.7150/jca.37017 |
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