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Stretching Wormlike Chains in Narrow Tubes of Arbitrary Cross-Sections

We considered the stretching of semiflexible polymer chains confined in narrow tubes with arbitrary cross-sections. Based on the wormlike chain model and technique of normal mode decomposition in statistical physics, we derived a compact analytical expression on the force-confinement-extension relat...

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Detalles Bibliográficos
Autores principales: Li, Ming, Wang, Jizeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6960511/
https://www.ncbi.nlm.nih.gov/pubmed/31835594
http://dx.doi.org/10.3390/polym11122050
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author Li, Ming
Wang, Jizeng
author_facet Li, Ming
Wang, Jizeng
author_sort Li, Ming
collection PubMed
description We considered the stretching of semiflexible polymer chains confined in narrow tubes with arbitrary cross-sections. Based on the wormlike chain model and technique of normal mode decomposition in statistical physics, we derived a compact analytical expression on the force-confinement-extension relation of the chains. This single formula was generalized to be valid for tube confinements with arbitrary cross-sections. In addition, we extended the generalized bead-rod model for Brownian dynamics simulations of confined polymer chains subjected to force stretching, so that the confinement effects to the chains applied by the tubes with arbitrary cross-sections can be quantitatively taken into account through numerical simulations. Extensive simulation examples on the wormlike chains confined in tubes of various shapes quantitatively justified the theoretically derived generalized formula on the force-confinement-extension relation of the chains.
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spelling pubmed-69605112020-01-23 Stretching Wormlike Chains in Narrow Tubes of Arbitrary Cross-Sections Li, Ming Wang, Jizeng Polymers (Basel) Article We considered the stretching of semiflexible polymer chains confined in narrow tubes with arbitrary cross-sections. Based on the wormlike chain model and technique of normal mode decomposition in statistical physics, we derived a compact analytical expression on the force-confinement-extension relation of the chains. This single formula was generalized to be valid for tube confinements with arbitrary cross-sections. In addition, we extended the generalized bead-rod model for Brownian dynamics simulations of confined polymer chains subjected to force stretching, so that the confinement effects to the chains applied by the tubes with arbitrary cross-sections can be quantitatively taken into account through numerical simulations. Extensive simulation examples on the wormlike chains confined in tubes of various shapes quantitatively justified the theoretically derived generalized formula on the force-confinement-extension relation of the chains. MDPI 2019-12-10 /pmc/articles/PMC6960511/ /pubmed/31835594 http://dx.doi.org/10.3390/polym11122050 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Li, Ming
Wang, Jizeng
Stretching Wormlike Chains in Narrow Tubes of Arbitrary Cross-Sections
title Stretching Wormlike Chains in Narrow Tubes of Arbitrary Cross-Sections
title_full Stretching Wormlike Chains in Narrow Tubes of Arbitrary Cross-Sections
title_fullStr Stretching Wormlike Chains in Narrow Tubes of Arbitrary Cross-Sections
title_full_unstemmed Stretching Wormlike Chains in Narrow Tubes of Arbitrary Cross-Sections
title_short Stretching Wormlike Chains in Narrow Tubes of Arbitrary Cross-Sections
title_sort stretching wormlike chains in narrow tubes of arbitrary cross-sections
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6960511/
https://www.ncbi.nlm.nih.gov/pubmed/31835594
http://dx.doi.org/10.3390/polym11122050
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