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Stretching Wormlike Chains in Narrow Tubes of Arbitrary Cross-Sections
We considered the stretching of semiflexible polymer chains confined in narrow tubes with arbitrary cross-sections. Based on the wormlike chain model and technique of normal mode decomposition in statistical physics, we derived a compact analytical expression on the force-confinement-extension relat...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6960511/ https://www.ncbi.nlm.nih.gov/pubmed/31835594 http://dx.doi.org/10.3390/polym11122050 |
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author | Li, Ming Wang, Jizeng |
author_facet | Li, Ming Wang, Jizeng |
author_sort | Li, Ming |
collection | PubMed |
description | We considered the stretching of semiflexible polymer chains confined in narrow tubes with arbitrary cross-sections. Based on the wormlike chain model and technique of normal mode decomposition in statistical physics, we derived a compact analytical expression on the force-confinement-extension relation of the chains. This single formula was generalized to be valid for tube confinements with arbitrary cross-sections. In addition, we extended the generalized bead-rod model for Brownian dynamics simulations of confined polymer chains subjected to force stretching, so that the confinement effects to the chains applied by the tubes with arbitrary cross-sections can be quantitatively taken into account through numerical simulations. Extensive simulation examples on the wormlike chains confined in tubes of various shapes quantitatively justified the theoretically derived generalized formula on the force-confinement-extension relation of the chains. |
format | Online Article Text |
id | pubmed-6960511 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-69605112020-01-23 Stretching Wormlike Chains in Narrow Tubes of Arbitrary Cross-Sections Li, Ming Wang, Jizeng Polymers (Basel) Article We considered the stretching of semiflexible polymer chains confined in narrow tubes with arbitrary cross-sections. Based on the wormlike chain model and technique of normal mode decomposition in statistical physics, we derived a compact analytical expression on the force-confinement-extension relation of the chains. This single formula was generalized to be valid for tube confinements with arbitrary cross-sections. In addition, we extended the generalized bead-rod model for Brownian dynamics simulations of confined polymer chains subjected to force stretching, so that the confinement effects to the chains applied by the tubes with arbitrary cross-sections can be quantitatively taken into account through numerical simulations. Extensive simulation examples on the wormlike chains confined in tubes of various shapes quantitatively justified the theoretically derived generalized formula on the force-confinement-extension relation of the chains. MDPI 2019-12-10 /pmc/articles/PMC6960511/ /pubmed/31835594 http://dx.doi.org/10.3390/polym11122050 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Li, Ming Wang, Jizeng Stretching Wormlike Chains in Narrow Tubes of Arbitrary Cross-Sections |
title | Stretching Wormlike Chains in Narrow Tubes of Arbitrary Cross-Sections |
title_full | Stretching Wormlike Chains in Narrow Tubes of Arbitrary Cross-Sections |
title_fullStr | Stretching Wormlike Chains in Narrow Tubes of Arbitrary Cross-Sections |
title_full_unstemmed | Stretching Wormlike Chains in Narrow Tubes of Arbitrary Cross-Sections |
title_short | Stretching Wormlike Chains in Narrow Tubes of Arbitrary Cross-Sections |
title_sort | stretching wormlike chains in narrow tubes of arbitrary cross-sections |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6960511/ https://www.ncbi.nlm.nih.gov/pubmed/31835594 http://dx.doi.org/10.3390/polym11122050 |
work_keys_str_mv | AT liming stretchingwormlikechainsinnarrowtubesofarbitrarycrosssections AT wangjizeng stretchingwormlikechainsinnarrowtubesofarbitrarycrosssections |