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Genome-wide analysis of PYL-PP2C-SnRK2s family in Camellia sinensis

Abscisic acid (ABA) signaling regulates plant growth and development and participates in response to abiotic stressors. However, details about the PYL-PP2C-SnRK2 gene family, which is the core component of ABA signaling in Camellia sinensis, are unknown. In this work, we identified 14 pyrabactin res...

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Autores principales: Xu, Ping, Zhang, Xueying, Su, Hui, Liu, Xiaofen, Wang, Yuefei, Hong, Gaojie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6961588/
https://www.ncbi.nlm.nih.gov/pubmed/31903833
http://dx.doi.org/10.1080/21655979.2019.1710932
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author Xu, Ping
Zhang, Xueying
Su, Hui
Liu, Xiaofen
Wang, Yuefei
Hong, Gaojie
author_facet Xu, Ping
Zhang, Xueying
Su, Hui
Liu, Xiaofen
Wang, Yuefei
Hong, Gaojie
author_sort Xu, Ping
collection PubMed
description Abscisic acid (ABA) signaling regulates plant growth and development and participates in response to abiotic stressors. However, details about the PYL-PP2C-SnRK2 gene family, which is the core component of ABA signaling in Camellia sinensis, are unknown. In this work, we identified 14 pyrabactin resistance-likes (PYLs), 84 type 2C protein phosphatase (PP2Cs), and 8 SNF1-related protein kinase 2s (SnRK2s) from C. sinensis. The transcriptomic analysis indicated that PYL-PP2C-SnRK2s were associated with changes of leaf color and the response of C. sinensis to drought and salt stressors. Changes of the expression of Snrk2s were not significant in the process of leaf color change or drought and salt stress response, suggesting that PYLs and PP2Cs may not interact with SnRK2s in C. sinensis during these processes. Finally, Gene Regulatory Network (GRN) construction and interaction networks analysis demonstrated that PYLs and PP2Cs were associated with multiple metabolic pathways during the changes of leaf color.
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spelling pubmed-69615882021-01-11 Genome-wide analysis of PYL-PP2C-SnRK2s family in Camellia sinensis Xu, Ping Zhang, Xueying Su, Hui Liu, Xiaofen Wang, Yuefei Hong, Gaojie Bioengineered Research Paper Abscisic acid (ABA) signaling regulates plant growth and development and participates in response to abiotic stressors. However, details about the PYL-PP2C-SnRK2 gene family, which is the core component of ABA signaling in Camellia sinensis, are unknown. In this work, we identified 14 pyrabactin resistance-likes (PYLs), 84 type 2C protein phosphatase (PP2Cs), and 8 SNF1-related protein kinase 2s (SnRK2s) from C. sinensis. The transcriptomic analysis indicated that PYL-PP2C-SnRK2s were associated with changes of leaf color and the response of C. sinensis to drought and salt stressors. Changes of the expression of Snrk2s were not significant in the process of leaf color change or drought and salt stress response, suggesting that PYLs and PP2Cs may not interact with SnRK2s in C. sinensis during these processes. Finally, Gene Regulatory Network (GRN) construction and interaction networks analysis demonstrated that PYLs and PP2Cs were associated with multiple metabolic pathways during the changes of leaf color. Taylor & Francis 2020-01-11 /pmc/articles/PMC6961588/ /pubmed/31903833 http://dx.doi.org/10.1080/21655979.2019.1710932 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Paper
Xu, Ping
Zhang, Xueying
Su, Hui
Liu, Xiaofen
Wang, Yuefei
Hong, Gaojie
Genome-wide analysis of PYL-PP2C-SnRK2s family in Camellia sinensis
title Genome-wide analysis of PYL-PP2C-SnRK2s family in Camellia sinensis
title_full Genome-wide analysis of PYL-PP2C-SnRK2s family in Camellia sinensis
title_fullStr Genome-wide analysis of PYL-PP2C-SnRK2s family in Camellia sinensis
title_full_unstemmed Genome-wide analysis of PYL-PP2C-SnRK2s family in Camellia sinensis
title_short Genome-wide analysis of PYL-PP2C-SnRK2s family in Camellia sinensis
title_sort genome-wide analysis of pyl-pp2c-snrk2s family in camellia sinensis
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6961588/
https://www.ncbi.nlm.nih.gov/pubmed/31903833
http://dx.doi.org/10.1080/21655979.2019.1710932
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