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Magnetic Resonance-Based Texture Analysis Differentiating KRAS Mutation Status in Rectal Cancer
PURPOSE: Mutation of the Kirsten Ras (KRAS) oncogene is present in 30%-40% of colorectal cancers and has prognostic significance in rectal cancer. In this study, we examined the ability of radiomics features extracted from T2-weighted magnetic resonance (MR) images to differentiate between tumors wi...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Korean Cancer Association
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6962487/ https://www.ncbi.nlm.nih.gov/pubmed/31096736 http://dx.doi.org/10.4143/crt.2019.050 |
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author | Oh, Ji Eun Kim, Min Ju Lee, Joohyung Hur, Bo Yun Kim, Bun Kim, Dae Yong Baek, Ji Yeon Chang, Hee Jin Park, Sung Chan Oh, Jae Hwan Cho, Sun Ah Sohn, Dae Kyung |
author_facet | Oh, Ji Eun Kim, Min Ju Lee, Joohyung Hur, Bo Yun Kim, Bun Kim, Dae Yong Baek, Ji Yeon Chang, Hee Jin Park, Sung Chan Oh, Jae Hwan Cho, Sun Ah Sohn, Dae Kyung |
author_sort | Oh, Ji Eun |
collection | PubMed |
description | PURPOSE: Mutation of the Kirsten Ras (KRAS) oncogene is present in 30%-40% of colorectal cancers and has prognostic significance in rectal cancer. In this study, we examined the ability of radiomics features extracted from T2-weighted magnetic resonance (MR) images to differentiate between tumors with mutant KRAS and wild-type KRAS. MATERIALS AND METHODS: Sixty patients with primary rectal cancer (25 with mutant KRAS, 35 with wild-type KRAS) were retrospectively enrolled. Texture analysis was performed in all regions of interest on MR images, which were manually segmented by two independent radiologists. We identified potentially useful imaging features using the two-tailed t test and used them to build a discriminant model with a decision tree to estimate whether KRAS mutation had occurred. RESULTS: Three radiomic features were significantly associated with KRAS mutational status (p < 0.05). The mean (and standard deviation) skewness with gradient filter value was significantly higher in the mutant KRAS group than in the wild-type group (2.04±0.94 vs. 1.59±0.69). Higher standard deviations for medium texture (SSF3 and SSF4) were able to differentiate mutant KRAS (139.81±44.19 and 267.12±89.75, respectively) and wild-type KRAS (114.55±29.30 and 224.78±62.20). The final decision tree comprised three decision nodes and four terminal nodes, two of which designated KRAS mutation. The sensitivity, specificity, and accuracy of the decision tree was 84%, 80%, and 81.7%, respectively. CONCLUSION: Using MR-based texture analysis, we identified three imaging features that could differentiate mutant from wild-type KRAS. T2-weighted images could be used to predict KRAS mutation status preoperatively in patients with rectal cancer. |
format | Online Article Text |
id | pubmed-6962487 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Korean Cancer Association |
record_format | MEDLINE/PubMed |
spelling | pubmed-69624872020-01-22 Magnetic Resonance-Based Texture Analysis Differentiating KRAS Mutation Status in Rectal Cancer Oh, Ji Eun Kim, Min Ju Lee, Joohyung Hur, Bo Yun Kim, Bun Kim, Dae Yong Baek, Ji Yeon Chang, Hee Jin Park, Sung Chan Oh, Jae Hwan Cho, Sun Ah Sohn, Dae Kyung Cancer Res Treat Original Article PURPOSE: Mutation of the Kirsten Ras (KRAS) oncogene is present in 30%-40% of colorectal cancers and has prognostic significance in rectal cancer. In this study, we examined the ability of radiomics features extracted from T2-weighted magnetic resonance (MR) images to differentiate between tumors with mutant KRAS and wild-type KRAS. MATERIALS AND METHODS: Sixty patients with primary rectal cancer (25 with mutant KRAS, 35 with wild-type KRAS) were retrospectively enrolled. Texture analysis was performed in all regions of interest on MR images, which were manually segmented by two independent radiologists. We identified potentially useful imaging features using the two-tailed t test and used them to build a discriminant model with a decision tree to estimate whether KRAS mutation had occurred. RESULTS: Three radiomic features were significantly associated with KRAS mutational status (p < 0.05). The mean (and standard deviation) skewness with gradient filter value was significantly higher in the mutant KRAS group than in the wild-type group (2.04±0.94 vs. 1.59±0.69). Higher standard deviations for medium texture (SSF3 and SSF4) were able to differentiate mutant KRAS (139.81±44.19 and 267.12±89.75, respectively) and wild-type KRAS (114.55±29.30 and 224.78±62.20). The final decision tree comprised three decision nodes and four terminal nodes, two of which designated KRAS mutation. The sensitivity, specificity, and accuracy of the decision tree was 84%, 80%, and 81.7%, respectively. CONCLUSION: Using MR-based texture analysis, we identified three imaging features that could differentiate mutant from wild-type KRAS. T2-weighted images could be used to predict KRAS mutation status preoperatively in patients with rectal cancer. Korean Cancer Association 2020-01 2019-05-07 /pmc/articles/PMC6962487/ /pubmed/31096736 http://dx.doi.org/10.4143/crt.2019.050 Text en Copyright © 2020 by the Korean Cancer Association This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Oh, Ji Eun Kim, Min Ju Lee, Joohyung Hur, Bo Yun Kim, Bun Kim, Dae Yong Baek, Ji Yeon Chang, Hee Jin Park, Sung Chan Oh, Jae Hwan Cho, Sun Ah Sohn, Dae Kyung Magnetic Resonance-Based Texture Analysis Differentiating KRAS Mutation Status in Rectal Cancer |
title | Magnetic Resonance-Based Texture Analysis Differentiating KRAS Mutation Status in Rectal Cancer |
title_full | Magnetic Resonance-Based Texture Analysis Differentiating KRAS Mutation Status in Rectal Cancer |
title_fullStr | Magnetic Resonance-Based Texture Analysis Differentiating KRAS Mutation Status in Rectal Cancer |
title_full_unstemmed | Magnetic Resonance-Based Texture Analysis Differentiating KRAS Mutation Status in Rectal Cancer |
title_short | Magnetic Resonance-Based Texture Analysis Differentiating KRAS Mutation Status in Rectal Cancer |
title_sort | magnetic resonance-based texture analysis differentiating kras mutation status in rectal cancer |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6962487/ https://www.ncbi.nlm.nih.gov/pubmed/31096736 http://dx.doi.org/10.4143/crt.2019.050 |
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