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Interpreting neural decoding models using grouped model reliance
Machine learning algorithms are becoming increasingly popular for decoding psychological constructs based on neural data. However, as a step towards bridging the gap between theory-driven cognitive neuroscience and data-driven decoding approaches, there is a need for methods that allow to interpret...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6964974/ https://www.ncbi.nlm.nih.gov/pubmed/31905373 http://dx.doi.org/10.1371/journal.pcbi.1007148 |
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author | Valentin, Simon Harkotte, Maximilian Popov, Tzvetan |
author_facet | Valentin, Simon Harkotte, Maximilian Popov, Tzvetan |
author_sort | Valentin, Simon |
collection | PubMed |
description | Machine learning algorithms are becoming increasingly popular for decoding psychological constructs based on neural data. However, as a step towards bridging the gap between theory-driven cognitive neuroscience and data-driven decoding approaches, there is a need for methods that allow to interpret trained decoding models. The present study demonstrates grouped model reliance as a model-agnostic permutation-based approach to this problem. Grouped model reliance indicates the extent to which a trained model relies on conceptually related groups of variables, such as frequency bands or regions of interest in electroencephalographic (EEG) data. As a case study to demonstrate the method, random forest and support vector machine models were trained on within-participant single-trial EEG data from a Sternberg working memory task. Participants were asked to memorize a sequence of digits (0–9), varying randomly in length between one, four and seven digits, where EEG recordings for working memory load estimation were taken from a 3-second retention interval. The present results confirm previous findings insofar as both random forest and support vector machine models relied on alpha-band activity in most subjects. However, as revealed by further analyses, patterns in frequency and topography varied considerably between individuals, pointing to more pronounced inter-individual differences than previously reported. |
format | Online Article Text |
id | pubmed-6964974 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-69649742020-01-26 Interpreting neural decoding models using grouped model reliance Valentin, Simon Harkotte, Maximilian Popov, Tzvetan PLoS Comput Biol Research Article Machine learning algorithms are becoming increasingly popular for decoding psychological constructs based on neural data. However, as a step towards bridging the gap between theory-driven cognitive neuroscience and data-driven decoding approaches, there is a need for methods that allow to interpret trained decoding models. The present study demonstrates grouped model reliance as a model-agnostic permutation-based approach to this problem. Grouped model reliance indicates the extent to which a trained model relies on conceptually related groups of variables, such as frequency bands or regions of interest in electroencephalographic (EEG) data. As a case study to demonstrate the method, random forest and support vector machine models were trained on within-participant single-trial EEG data from a Sternberg working memory task. Participants were asked to memorize a sequence of digits (0–9), varying randomly in length between one, four and seven digits, where EEG recordings for working memory load estimation were taken from a 3-second retention interval. The present results confirm previous findings insofar as both random forest and support vector machine models relied on alpha-band activity in most subjects. However, as revealed by further analyses, patterns in frequency and topography varied considerably between individuals, pointing to more pronounced inter-individual differences than previously reported. Public Library of Science 2020-01-06 /pmc/articles/PMC6964974/ /pubmed/31905373 http://dx.doi.org/10.1371/journal.pcbi.1007148 Text en © 2020 Valentin et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Valentin, Simon Harkotte, Maximilian Popov, Tzvetan Interpreting neural decoding models using grouped model reliance |
title | Interpreting neural decoding models using grouped model reliance |
title_full | Interpreting neural decoding models using grouped model reliance |
title_fullStr | Interpreting neural decoding models using grouped model reliance |
title_full_unstemmed | Interpreting neural decoding models using grouped model reliance |
title_short | Interpreting neural decoding models using grouped model reliance |
title_sort | interpreting neural decoding models using grouped model reliance |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6964974/ https://www.ncbi.nlm.nih.gov/pubmed/31905373 http://dx.doi.org/10.1371/journal.pcbi.1007148 |
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