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PCaLiStDB: a lifestyle database for precision prevention of prostate cancer

The interaction between genes, lifestyles and environmental factors makes the genesis and progress of prostate cancer (PCa) very heterogeneous. Positive lifestyle is important to the prevention and controlling of PCa. To investigate the relationship between PCa and lifestyle at systems level, we est...

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Autores principales: Chen, Yalan, Liu, Xingyun, Yu, Yijun, Yu, Chunjiang, Yang, Lan, Lin, Yuxin, Xi, Ting, Ye, Ziyun, Feng, Zhe, Shen, Bairong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6966110/
https://www.ncbi.nlm.nih.gov/pubmed/31950190
http://dx.doi.org/10.1093/database/baz154
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author Chen, Yalan
Liu, Xingyun
Yu, Yijun
Yu, Chunjiang
Yang, Lan
Lin, Yuxin
Xi, Ting
Ye, Ziyun
Feng, Zhe
Shen, Bairong
author_facet Chen, Yalan
Liu, Xingyun
Yu, Yijun
Yu, Chunjiang
Yang, Lan
Lin, Yuxin
Xi, Ting
Ye, Ziyun
Feng, Zhe
Shen, Bairong
author_sort Chen, Yalan
collection PubMed
description The interaction between genes, lifestyles and environmental factors makes the genesis and progress of prostate cancer (PCa) very heterogeneous. Positive lifestyle is important to the prevention and controlling of PCa. To investigate the relationship between PCa and lifestyle at systems level, we established a PCa related lifestyle database (PCaLiStDB) and collected the PCa-related lifestyles including foods, nutrients, life habits and social and environmental factors as well as associated genes and physiological and biochemical indexes together with the disease phenotypes and drugs. Data format standardization was implemented for the future Lifestyle-Wide Association Studies of PCa (PCa_LWAS). Currently, 2290 single-factor lifestyles and 856 joint effects of two or more lifestyles were collected. Among these, 394 are protective factors, 556 are risk factors, 45 are no-influencing factors, 52 are factors with contradictory views and 1977 factors are lacking effective literatures support. PCaLiStDB is expected to facilitate the prevention and control of PCa, as well as the promotion of mechanistic study of lifestyles on PCa. Database URL: http://www.sysbio.org.cn/pcalistdb/
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spelling pubmed-69661102020-01-23 PCaLiStDB: a lifestyle database for precision prevention of prostate cancer Chen, Yalan Liu, Xingyun Yu, Yijun Yu, Chunjiang Yang, Lan Lin, Yuxin Xi, Ting Ye, Ziyun Feng, Zhe Shen, Bairong Database (Oxford) Original Article The interaction between genes, lifestyles and environmental factors makes the genesis and progress of prostate cancer (PCa) very heterogeneous. Positive lifestyle is important to the prevention and controlling of PCa. To investigate the relationship between PCa and lifestyle at systems level, we established a PCa related lifestyle database (PCaLiStDB) and collected the PCa-related lifestyles including foods, nutrients, life habits and social and environmental factors as well as associated genes and physiological and biochemical indexes together with the disease phenotypes and drugs. Data format standardization was implemented for the future Lifestyle-Wide Association Studies of PCa (PCa_LWAS). Currently, 2290 single-factor lifestyles and 856 joint effects of two or more lifestyles were collected. Among these, 394 are protective factors, 556 are risk factors, 45 are no-influencing factors, 52 are factors with contradictory views and 1977 factors are lacking effective literatures support. PCaLiStDB is expected to facilitate the prevention and control of PCa, as well as the promotion of mechanistic study of lifestyles on PCa. Database URL: http://www.sysbio.org.cn/pcalistdb/ Oxford University Press 2020-01-16 /pmc/articles/PMC6966110/ /pubmed/31950190 http://dx.doi.org/10.1093/database/baz154 Text en © The Author(s) 2020. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Chen, Yalan
Liu, Xingyun
Yu, Yijun
Yu, Chunjiang
Yang, Lan
Lin, Yuxin
Xi, Ting
Ye, Ziyun
Feng, Zhe
Shen, Bairong
PCaLiStDB: a lifestyle database for precision prevention of prostate cancer
title PCaLiStDB: a lifestyle database for precision prevention of prostate cancer
title_full PCaLiStDB: a lifestyle database for precision prevention of prostate cancer
title_fullStr PCaLiStDB: a lifestyle database for precision prevention of prostate cancer
title_full_unstemmed PCaLiStDB: a lifestyle database for precision prevention of prostate cancer
title_short PCaLiStDB: a lifestyle database for precision prevention of prostate cancer
title_sort pcalistdb: a lifestyle database for precision prevention of prostate cancer
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6966110/
https://www.ncbi.nlm.nih.gov/pubmed/31950190
http://dx.doi.org/10.1093/database/baz154
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