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PCaLiStDB: a lifestyle database for precision prevention of prostate cancer
The interaction between genes, lifestyles and environmental factors makes the genesis and progress of prostate cancer (PCa) very heterogeneous. Positive lifestyle is important to the prevention and controlling of PCa. To investigate the relationship between PCa and lifestyle at systems level, we est...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6966110/ https://www.ncbi.nlm.nih.gov/pubmed/31950190 http://dx.doi.org/10.1093/database/baz154 |
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author | Chen, Yalan Liu, Xingyun Yu, Yijun Yu, Chunjiang Yang, Lan Lin, Yuxin Xi, Ting Ye, Ziyun Feng, Zhe Shen, Bairong |
author_facet | Chen, Yalan Liu, Xingyun Yu, Yijun Yu, Chunjiang Yang, Lan Lin, Yuxin Xi, Ting Ye, Ziyun Feng, Zhe Shen, Bairong |
author_sort | Chen, Yalan |
collection | PubMed |
description | The interaction between genes, lifestyles and environmental factors makes the genesis and progress of prostate cancer (PCa) very heterogeneous. Positive lifestyle is important to the prevention and controlling of PCa. To investigate the relationship between PCa and lifestyle at systems level, we established a PCa related lifestyle database (PCaLiStDB) and collected the PCa-related lifestyles including foods, nutrients, life habits and social and environmental factors as well as associated genes and physiological and biochemical indexes together with the disease phenotypes and drugs. Data format standardization was implemented for the future Lifestyle-Wide Association Studies of PCa (PCa_LWAS). Currently, 2290 single-factor lifestyles and 856 joint effects of two or more lifestyles were collected. Among these, 394 are protective factors, 556 are risk factors, 45 are no-influencing factors, 52 are factors with contradictory views and 1977 factors are lacking effective literatures support. PCaLiStDB is expected to facilitate the prevention and control of PCa, as well as the promotion of mechanistic study of lifestyles on PCa. Database URL: http://www.sysbio.org.cn/pcalistdb/ |
format | Online Article Text |
id | pubmed-6966110 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-69661102020-01-23 PCaLiStDB: a lifestyle database for precision prevention of prostate cancer Chen, Yalan Liu, Xingyun Yu, Yijun Yu, Chunjiang Yang, Lan Lin, Yuxin Xi, Ting Ye, Ziyun Feng, Zhe Shen, Bairong Database (Oxford) Original Article The interaction between genes, lifestyles and environmental factors makes the genesis and progress of prostate cancer (PCa) very heterogeneous. Positive lifestyle is important to the prevention and controlling of PCa. To investigate the relationship between PCa and lifestyle at systems level, we established a PCa related lifestyle database (PCaLiStDB) and collected the PCa-related lifestyles including foods, nutrients, life habits and social and environmental factors as well as associated genes and physiological and biochemical indexes together with the disease phenotypes and drugs. Data format standardization was implemented for the future Lifestyle-Wide Association Studies of PCa (PCa_LWAS). Currently, 2290 single-factor lifestyles and 856 joint effects of two or more lifestyles were collected. Among these, 394 are protective factors, 556 are risk factors, 45 are no-influencing factors, 52 are factors with contradictory views and 1977 factors are lacking effective literatures support. PCaLiStDB is expected to facilitate the prevention and control of PCa, as well as the promotion of mechanistic study of lifestyles on PCa. Database URL: http://www.sysbio.org.cn/pcalistdb/ Oxford University Press 2020-01-16 /pmc/articles/PMC6966110/ /pubmed/31950190 http://dx.doi.org/10.1093/database/baz154 Text en © The Author(s) 2020. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Chen, Yalan Liu, Xingyun Yu, Yijun Yu, Chunjiang Yang, Lan Lin, Yuxin Xi, Ting Ye, Ziyun Feng, Zhe Shen, Bairong PCaLiStDB: a lifestyle database for precision prevention of prostate cancer |
title | PCaLiStDB: a lifestyle database for precision prevention of prostate cancer |
title_full | PCaLiStDB: a lifestyle database for precision prevention of prostate cancer |
title_fullStr | PCaLiStDB: a lifestyle database for precision prevention of prostate cancer |
title_full_unstemmed | PCaLiStDB: a lifestyle database for precision prevention of prostate cancer |
title_short | PCaLiStDB: a lifestyle database for precision prevention of prostate cancer |
title_sort | pcalistdb: a lifestyle database for precision prevention of prostate cancer |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6966110/ https://www.ncbi.nlm.nih.gov/pubmed/31950190 http://dx.doi.org/10.1093/database/baz154 |
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