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Sampling methods affect Nematode-Trapping Fungi biodiversity patterns across an elevational gradient

BACKGROUND: Understanding the patterns of species richness across elevational gradients is a key concept for contemporary research in ecology and evolution, and critical to understanding large-scale trends in biodiversity, global change and conservation. However, patterns of elevational species rich...

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Autores principales: Deng, Wei, Wang, Jia-Liang, Scott, Matthew B., Fang, Yi-Hao, Liu, Shuo-Ran, Yang, Xiao-Yan, Xiao, Wen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6966870/
https://www.ncbi.nlm.nih.gov/pubmed/31948391
http://dx.doi.org/10.1186/s12866-020-1696-z
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author Deng, Wei
Wang, Jia-Liang
Scott, Matthew B.
Fang, Yi-Hao
Liu, Shuo-Ran
Yang, Xiao-Yan
Xiao, Wen
author_facet Deng, Wei
Wang, Jia-Liang
Scott, Matthew B.
Fang, Yi-Hao
Liu, Shuo-Ran
Yang, Xiao-Yan
Xiao, Wen
author_sort Deng, Wei
collection PubMed
description BACKGROUND: Understanding the patterns of species richness across elevational gradients is a key concept for contemporary research in ecology and evolution, and critical to understanding large-scale trends in biodiversity, global change and conservation. However, patterns of elevational species richness between taxonomic groups, regions and latitudes are inconsistent, so that various, sometimes conflicting hypotheses exist. Several scholars have pointed out that research on elevational distribution patterns is often biased by the sampling design employed. To test this hypothesis, we analyzed species richness of Nematode-Trapping Fungi (NTF) across an elevation gradient at two mountainous sites in western Yunnan Province, P.R. China. We tested for potential differences in the results when using different sampling designs. RESULTS: A total of 3 genera, 17 species, 222 strains of NTF were isolated and identified from Gaoligongshan and Cangshan. Species accumulation curves for both sites and sampling modes had acceptable leveling, demonstrating sufficient sampling effort. At Gaoligongshan, the elevation distribution patterns of NTF were different under two sampling patterns. When reducing the analyzed altitude range in Gaoligongshan, the elevation distribution pattern of the NTF changed. A similar elevation distribution pattern was observed in Cangshan when testing the same altitude range. In general, when treating the same dataset using different sampling designs, the resulting distribution patterns of species richness and occurrence frequencies were clearly different. Moreover, after removal of the samples located within lower-altitude zones affected by anthropogenic interferences, the distribution pattern of NTF in the two sites tended to become uniform. CONCLUSION: The sampling design, and in particular the elevation interval between plots, has a significant effect on the assessment of species distribution in mountainous regions. Other factors such as human activities and the multi-dimensionality of biodiversity also contribute to result biases. It is recommended that sampling design is given careful consideration in future studies on the elevational gradients of species richness, using stratified approaches according to the most relevant factors.
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spelling pubmed-69668702020-01-27 Sampling methods affect Nematode-Trapping Fungi biodiversity patterns across an elevational gradient Deng, Wei Wang, Jia-Liang Scott, Matthew B. Fang, Yi-Hao Liu, Shuo-Ran Yang, Xiao-Yan Xiao, Wen BMC Microbiol Research Article BACKGROUND: Understanding the patterns of species richness across elevational gradients is a key concept for contemporary research in ecology and evolution, and critical to understanding large-scale trends in biodiversity, global change and conservation. However, patterns of elevational species richness between taxonomic groups, regions and latitudes are inconsistent, so that various, sometimes conflicting hypotheses exist. Several scholars have pointed out that research on elevational distribution patterns is often biased by the sampling design employed. To test this hypothesis, we analyzed species richness of Nematode-Trapping Fungi (NTF) across an elevation gradient at two mountainous sites in western Yunnan Province, P.R. China. We tested for potential differences in the results when using different sampling designs. RESULTS: A total of 3 genera, 17 species, 222 strains of NTF were isolated and identified from Gaoligongshan and Cangshan. Species accumulation curves for both sites and sampling modes had acceptable leveling, demonstrating sufficient sampling effort. At Gaoligongshan, the elevation distribution patterns of NTF were different under two sampling patterns. When reducing the analyzed altitude range in Gaoligongshan, the elevation distribution pattern of the NTF changed. A similar elevation distribution pattern was observed in Cangshan when testing the same altitude range. In general, when treating the same dataset using different sampling designs, the resulting distribution patterns of species richness and occurrence frequencies were clearly different. Moreover, after removal of the samples located within lower-altitude zones affected by anthropogenic interferences, the distribution pattern of NTF in the two sites tended to become uniform. CONCLUSION: The sampling design, and in particular the elevation interval between plots, has a significant effect on the assessment of species distribution in mountainous regions. Other factors such as human activities and the multi-dimensionality of biodiversity also contribute to result biases. It is recommended that sampling design is given careful consideration in future studies on the elevational gradients of species richness, using stratified approaches according to the most relevant factors. BioMed Central 2020-01-16 /pmc/articles/PMC6966870/ /pubmed/31948391 http://dx.doi.org/10.1186/s12866-020-1696-z Text en © The Author(s). 2020 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Deng, Wei
Wang, Jia-Liang
Scott, Matthew B.
Fang, Yi-Hao
Liu, Shuo-Ran
Yang, Xiao-Yan
Xiao, Wen
Sampling methods affect Nematode-Trapping Fungi biodiversity patterns across an elevational gradient
title Sampling methods affect Nematode-Trapping Fungi biodiversity patterns across an elevational gradient
title_full Sampling methods affect Nematode-Trapping Fungi biodiversity patterns across an elevational gradient
title_fullStr Sampling methods affect Nematode-Trapping Fungi biodiversity patterns across an elevational gradient
title_full_unstemmed Sampling methods affect Nematode-Trapping Fungi biodiversity patterns across an elevational gradient
title_short Sampling methods affect Nematode-Trapping Fungi biodiversity patterns across an elevational gradient
title_sort sampling methods affect nematode-trapping fungi biodiversity patterns across an elevational gradient
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6966870/
https://www.ncbi.nlm.nih.gov/pubmed/31948391
http://dx.doi.org/10.1186/s12866-020-1696-z
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