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Autophagy-related genes prognosis signature as potential predictive markers for immunotherapy in hepatocellular carcinoma

Autophagy-related genes (ATGs) depress tumorigenesis. However, in tumor tissue, it promotes tumor progression. Here, we demonstrated that 63 ATGs were differentially expressed in normal tissues and tumor tissues of hepatocellular carcinoma (HCC), and seven prognostic-related genes were chosen to est...

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Autores principales: Mao, Deli, Zhang, Zhe, Zhao, Xin, Dong, Xiaoqiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6970541/
https://www.ncbi.nlm.nih.gov/pubmed/31988807
http://dx.doi.org/10.7717/peerj.8383
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author Mao, Deli
Zhang, Zhe
Zhao, Xin
Dong, Xiaoqiang
author_facet Mao, Deli
Zhang, Zhe
Zhao, Xin
Dong, Xiaoqiang
author_sort Mao, Deli
collection PubMed
description Autophagy-related genes (ATGs) depress tumorigenesis. However, in tumor tissue, it promotes tumor progression. Here, we demonstrated that 63 ATGs were differentially expressed in normal tissues and tumor tissues of hepatocellular carcinoma (HCC), and seven prognostic-related genes were chosen to establish prognostic risk signatures. It is not just an independent prognostic factor for HCC, but also closely related to the degree of malignancy of HCC. Further, the hallmarks of PI3K–AKT–mTOR signaling was significantly enriched in the high-risk group. Moreover, AKT–pS473 and mTOR–pS2448 expression was down-regulated and correlated with patient prognosis in high-risk group. Finally, we demonstrate that the prognosis signature of ATGs is closely related to immune cell infiltration and PD-L1 expression. In conclusion, ATGs are a crucial factor in the malignant progression of HCC and will be a new prognostic marker for diagnosis and treatment. ATGs prognostic signatures are potentially useful for predicting PD-L1 therapeutic effects.
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spelling pubmed-69705412020-01-27 Autophagy-related genes prognosis signature as potential predictive markers for immunotherapy in hepatocellular carcinoma Mao, Deli Zhang, Zhe Zhao, Xin Dong, Xiaoqiang PeerJ Bioinformatics Autophagy-related genes (ATGs) depress tumorigenesis. However, in tumor tissue, it promotes tumor progression. Here, we demonstrated that 63 ATGs were differentially expressed in normal tissues and tumor tissues of hepatocellular carcinoma (HCC), and seven prognostic-related genes were chosen to establish prognostic risk signatures. It is not just an independent prognostic factor for HCC, but also closely related to the degree of malignancy of HCC. Further, the hallmarks of PI3K–AKT–mTOR signaling was significantly enriched in the high-risk group. Moreover, AKT–pS473 and mTOR–pS2448 expression was down-regulated and correlated with patient prognosis in high-risk group. Finally, we demonstrate that the prognosis signature of ATGs is closely related to immune cell infiltration and PD-L1 expression. In conclusion, ATGs are a crucial factor in the malignant progression of HCC and will be a new prognostic marker for diagnosis and treatment. ATGs prognostic signatures are potentially useful for predicting PD-L1 therapeutic effects. PeerJ Inc. 2020-01-17 /pmc/articles/PMC6970541/ /pubmed/31988807 http://dx.doi.org/10.7717/peerj.8383 Text en © 2020 Mao et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Bioinformatics
Mao, Deli
Zhang, Zhe
Zhao, Xin
Dong, Xiaoqiang
Autophagy-related genes prognosis signature as potential predictive markers for immunotherapy in hepatocellular carcinoma
title Autophagy-related genes prognosis signature as potential predictive markers for immunotherapy in hepatocellular carcinoma
title_full Autophagy-related genes prognosis signature as potential predictive markers for immunotherapy in hepatocellular carcinoma
title_fullStr Autophagy-related genes prognosis signature as potential predictive markers for immunotherapy in hepatocellular carcinoma
title_full_unstemmed Autophagy-related genes prognosis signature as potential predictive markers for immunotherapy in hepatocellular carcinoma
title_short Autophagy-related genes prognosis signature as potential predictive markers for immunotherapy in hepatocellular carcinoma
title_sort autophagy-related genes prognosis signature as potential predictive markers for immunotherapy in hepatocellular carcinoma
topic Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6970541/
https://www.ncbi.nlm.nih.gov/pubmed/31988807
http://dx.doi.org/10.7717/peerj.8383
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