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Autophagy-related genes prognosis signature as potential predictive markers for immunotherapy in hepatocellular carcinoma
Autophagy-related genes (ATGs) depress tumorigenesis. However, in tumor tissue, it promotes tumor progression. Here, we demonstrated that 63 ATGs were differentially expressed in normal tissues and tumor tissues of hepatocellular carcinoma (HCC), and seven prognostic-related genes were chosen to est...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6970541/ https://www.ncbi.nlm.nih.gov/pubmed/31988807 http://dx.doi.org/10.7717/peerj.8383 |
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author | Mao, Deli Zhang, Zhe Zhao, Xin Dong, Xiaoqiang |
author_facet | Mao, Deli Zhang, Zhe Zhao, Xin Dong, Xiaoqiang |
author_sort | Mao, Deli |
collection | PubMed |
description | Autophagy-related genes (ATGs) depress tumorigenesis. However, in tumor tissue, it promotes tumor progression. Here, we demonstrated that 63 ATGs were differentially expressed in normal tissues and tumor tissues of hepatocellular carcinoma (HCC), and seven prognostic-related genes were chosen to establish prognostic risk signatures. It is not just an independent prognostic factor for HCC, but also closely related to the degree of malignancy of HCC. Further, the hallmarks of PI3K–AKT–mTOR signaling was significantly enriched in the high-risk group. Moreover, AKT–pS473 and mTOR–pS2448 expression was down-regulated and correlated with patient prognosis in high-risk group. Finally, we demonstrate that the prognosis signature of ATGs is closely related to immune cell infiltration and PD-L1 expression. In conclusion, ATGs are a crucial factor in the malignant progression of HCC and will be a new prognostic marker for diagnosis and treatment. ATGs prognostic signatures are potentially useful for predicting PD-L1 therapeutic effects. |
format | Online Article Text |
id | pubmed-6970541 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-69705412020-01-27 Autophagy-related genes prognosis signature as potential predictive markers for immunotherapy in hepatocellular carcinoma Mao, Deli Zhang, Zhe Zhao, Xin Dong, Xiaoqiang PeerJ Bioinformatics Autophagy-related genes (ATGs) depress tumorigenesis. However, in tumor tissue, it promotes tumor progression. Here, we demonstrated that 63 ATGs were differentially expressed in normal tissues and tumor tissues of hepatocellular carcinoma (HCC), and seven prognostic-related genes were chosen to establish prognostic risk signatures. It is not just an independent prognostic factor for HCC, but also closely related to the degree of malignancy of HCC. Further, the hallmarks of PI3K–AKT–mTOR signaling was significantly enriched in the high-risk group. Moreover, AKT–pS473 and mTOR–pS2448 expression was down-regulated and correlated with patient prognosis in high-risk group. Finally, we demonstrate that the prognosis signature of ATGs is closely related to immune cell infiltration and PD-L1 expression. In conclusion, ATGs are a crucial factor in the malignant progression of HCC and will be a new prognostic marker for diagnosis and treatment. ATGs prognostic signatures are potentially useful for predicting PD-L1 therapeutic effects. PeerJ Inc. 2020-01-17 /pmc/articles/PMC6970541/ /pubmed/31988807 http://dx.doi.org/10.7717/peerj.8383 Text en © 2020 Mao et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Bioinformatics Mao, Deli Zhang, Zhe Zhao, Xin Dong, Xiaoqiang Autophagy-related genes prognosis signature as potential predictive markers for immunotherapy in hepatocellular carcinoma |
title | Autophagy-related genes prognosis signature as potential predictive markers for immunotherapy in hepatocellular carcinoma |
title_full | Autophagy-related genes prognosis signature as potential predictive markers for immunotherapy in hepatocellular carcinoma |
title_fullStr | Autophagy-related genes prognosis signature as potential predictive markers for immunotherapy in hepatocellular carcinoma |
title_full_unstemmed | Autophagy-related genes prognosis signature as potential predictive markers for immunotherapy in hepatocellular carcinoma |
title_short | Autophagy-related genes prognosis signature as potential predictive markers for immunotherapy in hepatocellular carcinoma |
title_sort | autophagy-related genes prognosis signature as potential predictive markers for immunotherapy in hepatocellular carcinoma |
topic | Bioinformatics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6970541/ https://www.ncbi.nlm.nih.gov/pubmed/31988807 http://dx.doi.org/10.7717/peerj.8383 |
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