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Sequence data describing the fungal community in a tropical quartzite soil
The soil fungal community of the Klang Gates quartz ridge in Malaysia was determined by ITS amplicon sequencing using the Illumina HiSeq platform. The community contained 2767 OTUs, 47% of which could not be assigned to a phylum, likely representing new lineages. Those that could be assigned were fo...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Elsevier
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6971373/ https://www.ncbi.nlm.nih.gov/pubmed/31993470 http://dx.doi.org/10.1016/j.dib.2020.105112 |
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author | Brearley, Francis Q. |
author_facet | Brearley, Francis Q. |
author_sort | Brearley, Francis Q. |
collection | PubMed |
description | The soil fungal community of the Klang Gates quartz ridge in Malaysia was determined by ITS amplicon sequencing using the Illumina HiSeq platform. The community contained 2767 OTUs, 47% of which could not be assigned to a phylum, likely representing new lineages. Those that could be assigned were found within 5 phyla, 16 classes, 49 orders and 98 families with over 85% of these within the Ascomycota. Sequence data is available from the NCBI's Sequence Read Archive (PRJNA542066). This data illustrates the microbial diversity in a particularly nutrient poor tropical soil and can be used for broader-scale comparisons of microbial distributions. |
format | Online Article Text |
id | pubmed-6971373 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-69713732020-01-28 Sequence data describing the fungal community in a tropical quartzite soil Brearley, Francis Q. Data Brief Genetics, Genomics and Molecular Biology The soil fungal community of the Klang Gates quartz ridge in Malaysia was determined by ITS amplicon sequencing using the Illumina HiSeq platform. The community contained 2767 OTUs, 47% of which could not be assigned to a phylum, likely representing new lineages. Those that could be assigned were found within 5 phyla, 16 classes, 49 orders and 98 families with over 85% of these within the Ascomycota. Sequence data is available from the NCBI's Sequence Read Archive (PRJNA542066). This data illustrates the microbial diversity in a particularly nutrient poor tropical soil and can be used for broader-scale comparisons of microbial distributions. Elsevier 2020-01-10 /pmc/articles/PMC6971373/ /pubmed/31993470 http://dx.doi.org/10.1016/j.dib.2020.105112 Text en © 2020 Published by Elsevier Inc. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Genetics, Genomics and Molecular Biology Brearley, Francis Q. Sequence data describing the fungal community in a tropical quartzite soil |
title | Sequence data describing the fungal community in a tropical quartzite soil |
title_full | Sequence data describing the fungal community in a tropical quartzite soil |
title_fullStr | Sequence data describing the fungal community in a tropical quartzite soil |
title_full_unstemmed | Sequence data describing the fungal community in a tropical quartzite soil |
title_short | Sequence data describing the fungal community in a tropical quartzite soil |
title_sort | sequence data describing the fungal community in a tropical quartzite soil |
topic | Genetics, Genomics and Molecular Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6971373/ https://www.ncbi.nlm.nih.gov/pubmed/31993470 http://dx.doi.org/10.1016/j.dib.2020.105112 |
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