Cargando…

Sequence data describing the fungal community in a tropical quartzite soil

The soil fungal community of the Klang Gates quartz ridge in Malaysia was determined by ITS amplicon sequencing using the Illumina HiSeq platform. The community contained 2767 OTUs, 47% of which could not be assigned to a phylum, likely representing new lineages. Those that could be assigned were fo...

Descripción completa

Detalles Bibliográficos
Autor principal: Brearley, Francis Q.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6971373/
https://www.ncbi.nlm.nih.gov/pubmed/31993470
http://dx.doi.org/10.1016/j.dib.2020.105112
_version_ 1783489713330454528
author Brearley, Francis Q.
author_facet Brearley, Francis Q.
author_sort Brearley, Francis Q.
collection PubMed
description The soil fungal community of the Klang Gates quartz ridge in Malaysia was determined by ITS amplicon sequencing using the Illumina HiSeq platform. The community contained 2767 OTUs, 47% of which could not be assigned to a phylum, likely representing new lineages. Those that could be assigned were found within 5 phyla, 16 classes, 49 orders and 98 families with over 85% of these within the Ascomycota. Sequence data is available from the NCBI's Sequence Read Archive (PRJNA542066). This data illustrates the microbial diversity in a particularly nutrient poor tropical soil and can be used for broader-scale comparisons of microbial distributions.
format Online
Article
Text
id pubmed-6971373
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-69713732020-01-28 Sequence data describing the fungal community in a tropical quartzite soil Brearley, Francis Q. Data Brief Genetics, Genomics and Molecular Biology The soil fungal community of the Klang Gates quartz ridge in Malaysia was determined by ITS amplicon sequencing using the Illumina HiSeq platform. The community contained 2767 OTUs, 47% of which could not be assigned to a phylum, likely representing new lineages. Those that could be assigned were found within 5 phyla, 16 classes, 49 orders and 98 families with over 85% of these within the Ascomycota. Sequence data is available from the NCBI's Sequence Read Archive (PRJNA542066). This data illustrates the microbial diversity in a particularly nutrient poor tropical soil and can be used for broader-scale comparisons of microbial distributions. Elsevier 2020-01-10 /pmc/articles/PMC6971373/ /pubmed/31993470 http://dx.doi.org/10.1016/j.dib.2020.105112 Text en © 2020 Published by Elsevier Inc. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Genetics, Genomics and Molecular Biology
Brearley, Francis Q.
Sequence data describing the fungal community in a tropical quartzite soil
title Sequence data describing the fungal community in a tropical quartzite soil
title_full Sequence data describing the fungal community in a tropical quartzite soil
title_fullStr Sequence data describing the fungal community in a tropical quartzite soil
title_full_unstemmed Sequence data describing the fungal community in a tropical quartzite soil
title_short Sequence data describing the fungal community in a tropical quartzite soil
title_sort sequence data describing the fungal community in a tropical quartzite soil
topic Genetics, Genomics and Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6971373/
https://www.ncbi.nlm.nih.gov/pubmed/31993470
http://dx.doi.org/10.1016/j.dib.2020.105112
work_keys_str_mv AT brearleyfrancisq sequencedatadescribingthefungalcommunityinatropicalquartzitesoil