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RNA sequencing data of tobacco inoculated with Apple stem pitting virus
Apple stem pitting virus (ASPV) mainly infects apple, pear and their closely related species in the world. ASPV causes some symptoms like leaf etiolation and stony pit in cultivated pear, but produces few symptoms in cultivated apple. We inoculated tobacco with ASPV, which originates from Nanking ch...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6971375/ https://www.ncbi.nlm.nih.gov/pubmed/31993465 http://dx.doi.org/10.1016/j.dib.2019.105106 |
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author | Yan, Gengxuan Yang, Hongyi |
author_facet | Yan, Gengxuan Yang, Hongyi |
author_sort | Yan, Gengxuan |
collection | PubMed |
description | Apple stem pitting virus (ASPV) mainly infects apple, pear and their closely related species in the world. ASPV causes some symptoms like leaf etiolation and stony pit in cultivated pear, but produces few symptoms in cultivated apple. We inoculated tobacco with ASPV, which originates from Nanking cherry (Prunus tomentosa), and we obtained tobacco RNA-sequencing data through high-throughput sequencing. In total, 17,401,736 clean reads were obtained after sequencing and removing adaptor sequences, contamination and low-quality reads. An RNA-seq data has been uploaded to Sequence Read Archive (SRA), which enables researchers to access the RNA-sequencing data of tobacco inoculated with ASPV. |
format | Online Article Text |
id | pubmed-6971375 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-69713752020-01-28 RNA sequencing data of tobacco inoculated with Apple stem pitting virus Yan, Gengxuan Yang, Hongyi Data Brief Agricultural and Biological Science Apple stem pitting virus (ASPV) mainly infects apple, pear and their closely related species in the world. ASPV causes some symptoms like leaf etiolation and stony pit in cultivated pear, but produces few symptoms in cultivated apple. We inoculated tobacco with ASPV, which originates from Nanking cherry (Prunus tomentosa), and we obtained tobacco RNA-sequencing data through high-throughput sequencing. In total, 17,401,736 clean reads were obtained after sequencing and removing adaptor sequences, contamination and low-quality reads. An RNA-seq data has been uploaded to Sequence Read Archive (SRA), which enables researchers to access the RNA-sequencing data of tobacco inoculated with ASPV. Elsevier 2020-01-03 /pmc/articles/PMC6971375/ /pubmed/31993465 http://dx.doi.org/10.1016/j.dib.2019.105106 Text en © 2020 The Author(s) http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Agricultural and Biological Science Yan, Gengxuan Yang, Hongyi RNA sequencing data of tobacco inoculated with Apple stem pitting virus |
title | RNA sequencing data of tobacco inoculated with Apple stem pitting virus |
title_full | RNA sequencing data of tobacco inoculated with Apple stem pitting virus |
title_fullStr | RNA sequencing data of tobacco inoculated with Apple stem pitting virus |
title_full_unstemmed | RNA sequencing data of tobacco inoculated with Apple stem pitting virus |
title_short | RNA sequencing data of tobacco inoculated with Apple stem pitting virus |
title_sort | rna sequencing data of tobacco inoculated with apple stem pitting virus |
topic | Agricultural and Biological Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6971375/ https://www.ncbi.nlm.nih.gov/pubmed/31993465 http://dx.doi.org/10.1016/j.dib.2019.105106 |
work_keys_str_mv | AT yangengxuan rnasequencingdataoftobaccoinoculatedwithapplestempittingvirus AT yanghongyi rnasequencingdataoftobaccoinoculatedwithapplestempittingvirus |