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Highly accelerated 4D flow cardiovascular magnetic resonance using a pseudo-spiral Cartesian acquisition and compressed sensing reconstruction for carotid flow and wall shear stress

BACKGROUND: 4D flow cardiovascular magnetic resonance (CMR) enables visualization of complex blood flow and quantification of biomarkers for vessel wall disease, such as wall shear stress (WSS). Because of the inherently long acquisition times, many efforts have been made to accelerate 4D flow acqui...

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Autores principales: Peper, Eva S., Gottwald, Lukas M., Zhang, Qinwei, Coolen, Bram F., van Ooij, Pim, Nederveen, Aart J., Strijkers, Gustav J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6971939/
https://www.ncbi.nlm.nih.gov/pubmed/31959203
http://dx.doi.org/10.1186/s12968-019-0582-z
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author Peper, Eva S.
Gottwald, Lukas M.
Zhang, Qinwei
Coolen, Bram F.
van Ooij, Pim
Nederveen, Aart J.
Strijkers, Gustav J.
author_facet Peper, Eva S.
Gottwald, Lukas M.
Zhang, Qinwei
Coolen, Bram F.
van Ooij, Pim
Nederveen, Aart J.
Strijkers, Gustav J.
author_sort Peper, Eva S.
collection PubMed
description BACKGROUND: 4D flow cardiovascular magnetic resonance (CMR) enables visualization of complex blood flow and quantification of biomarkers for vessel wall disease, such as wall shear stress (WSS). Because of the inherently long acquisition times, many efforts have been made to accelerate 4D flow acquisitions, however, no detailed analysis has been made on the effect of Cartesian compressed sensing accelerated 4D flow CMR at different undersampling rates on quantitative flow parameters and WSS. METHODS: We implemented a retrospectively triggered 4D flow CMR acquisition with pseudo-spiral Cartesian k-space filling, which results in incoherent undersampling of k-t space. Additionally, this strategy leads to small jumps in k-space thereby minimizing eddy current related artifacts. The pseudo-spirals were rotated in a tiny golden-angle fashion, which provides optimal incoherence and a variable density sampling pattern with a fully sampled center. We evaluated this 4D flow protocol in a carotid flow phantom with accelerations of R = 2–20, as well as in carotids of 7 healthy subjects (27 ± 2 years, 4 male) for R = 10–30. Fully sampled 2D flow CMR served as a flow reference. Arteries were manually segmented and registered to enable voxel-wise comparisons of both velocity and WSS using a Bland-Altman analysis. RESULTS: Magnitude images, velocity images, and pathline reconstructions from phantom and in vivo scans were similar for all accelerations. For the phantom data, mean differences at peak systole for the entire vessel volume in comparison to R = 2 ranged from − 2.3 to − 5.3% (WSS) and − 2.4 to − 2.2% (velocity) for acceleration factors R = 4–20. For the in vivo data, mean differences for the entire vessel volume at peak systole in comparison to R = 10 were − 9.9, − 13.4, and − 16.9% (WSS) and − 8.4, − 10.8, and − 14.0% (velocity), for R = 20, 25, and 30, respectively. Compared to single slice 2D flow CMR acquisitions, peak systolic flow rates of the phantom showed no differences, whereas peak systolic flow rates in the carotid artery in vivo became increasingly underestimated with increasing acceleration. CONCLUSION: Acquisition of 4D flow CMR of the carotid arteries can be highly accelerated by pseudo-spiral k-space sampling and compressed sensing reconstruction, with consistent data quality facilitating velocity pathline reconstructions, as well as quantitative flow rate and WSS estimations. At an acceleration factor of R = 20 the underestimation of peak velocity and peak WSS was acceptable (< 10%) in comparison to an R = 10 accelerated 4D flow CMR reference scan. Peak flow rates were underestimated in comparison with 2D flow CMR and decreased systematically with higher acceleration factors.
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spelling pubmed-69719392020-01-27 Highly accelerated 4D flow cardiovascular magnetic resonance using a pseudo-spiral Cartesian acquisition and compressed sensing reconstruction for carotid flow and wall shear stress Peper, Eva S. Gottwald, Lukas M. Zhang, Qinwei Coolen, Bram F. van Ooij, Pim Nederveen, Aart J. Strijkers, Gustav J. J Cardiovasc Magn Reson Research BACKGROUND: 4D flow cardiovascular magnetic resonance (CMR) enables visualization of complex blood flow and quantification of biomarkers for vessel wall disease, such as wall shear stress (WSS). Because of the inherently long acquisition times, many efforts have been made to accelerate 4D flow acquisitions, however, no detailed analysis has been made on the effect of Cartesian compressed sensing accelerated 4D flow CMR at different undersampling rates on quantitative flow parameters and WSS. METHODS: We implemented a retrospectively triggered 4D flow CMR acquisition with pseudo-spiral Cartesian k-space filling, which results in incoherent undersampling of k-t space. Additionally, this strategy leads to small jumps in k-space thereby minimizing eddy current related artifacts. The pseudo-spirals were rotated in a tiny golden-angle fashion, which provides optimal incoherence and a variable density sampling pattern with a fully sampled center. We evaluated this 4D flow protocol in a carotid flow phantom with accelerations of R = 2–20, as well as in carotids of 7 healthy subjects (27 ± 2 years, 4 male) for R = 10–30. Fully sampled 2D flow CMR served as a flow reference. Arteries were manually segmented and registered to enable voxel-wise comparisons of both velocity and WSS using a Bland-Altman analysis. RESULTS: Magnitude images, velocity images, and pathline reconstructions from phantom and in vivo scans were similar for all accelerations. For the phantom data, mean differences at peak systole for the entire vessel volume in comparison to R = 2 ranged from − 2.3 to − 5.3% (WSS) and − 2.4 to − 2.2% (velocity) for acceleration factors R = 4–20. For the in vivo data, mean differences for the entire vessel volume at peak systole in comparison to R = 10 were − 9.9, − 13.4, and − 16.9% (WSS) and − 8.4, − 10.8, and − 14.0% (velocity), for R = 20, 25, and 30, respectively. Compared to single slice 2D flow CMR acquisitions, peak systolic flow rates of the phantom showed no differences, whereas peak systolic flow rates in the carotid artery in vivo became increasingly underestimated with increasing acceleration. CONCLUSION: Acquisition of 4D flow CMR of the carotid arteries can be highly accelerated by pseudo-spiral k-space sampling and compressed sensing reconstruction, with consistent data quality facilitating velocity pathline reconstructions, as well as quantitative flow rate and WSS estimations. At an acceleration factor of R = 20 the underestimation of peak velocity and peak WSS was acceptable (< 10%) in comparison to an R = 10 accelerated 4D flow CMR reference scan. Peak flow rates were underestimated in comparison with 2D flow CMR and decreased systematically with higher acceleration factors. BioMed Central 2020-01-20 /pmc/articles/PMC6971939/ /pubmed/31959203 http://dx.doi.org/10.1186/s12968-019-0582-z Text en © The Author(s). 2020 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Peper, Eva S.
Gottwald, Lukas M.
Zhang, Qinwei
Coolen, Bram F.
van Ooij, Pim
Nederveen, Aart J.
Strijkers, Gustav J.
Highly accelerated 4D flow cardiovascular magnetic resonance using a pseudo-spiral Cartesian acquisition and compressed sensing reconstruction for carotid flow and wall shear stress
title Highly accelerated 4D flow cardiovascular magnetic resonance using a pseudo-spiral Cartesian acquisition and compressed sensing reconstruction for carotid flow and wall shear stress
title_full Highly accelerated 4D flow cardiovascular magnetic resonance using a pseudo-spiral Cartesian acquisition and compressed sensing reconstruction for carotid flow and wall shear stress
title_fullStr Highly accelerated 4D flow cardiovascular magnetic resonance using a pseudo-spiral Cartesian acquisition and compressed sensing reconstruction for carotid flow and wall shear stress
title_full_unstemmed Highly accelerated 4D flow cardiovascular magnetic resonance using a pseudo-spiral Cartesian acquisition and compressed sensing reconstruction for carotid flow and wall shear stress
title_short Highly accelerated 4D flow cardiovascular magnetic resonance using a pseudo-spiral Cartesian acquisition and compressed sensing reconstruction for carotid flow and wall shear stress
title_sort highly accelerated 4d flow cardiovascular magnetic resonance using a pseudo-spiral cartesian acquisition and compressed sensing reconstruction for carotid flow and wall shear stress
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6971939/
https://www.ncbi.nlm.nih.gov/pubmed/31959203
http://dx.doi.org/10.1186/s12968-019-0582-z
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