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Calibration of arterial spin labeling data—potential pitfalls in post‐processing

PURPOSE: To assess the impact of the different post‐processing options in the calibration of arterial spin labeling (ASL) data on perfusion quantification and its reproducibility. THEORY AND METHODS: Absolute quantification of perfusion measurements is one of the promises of ASL techniques. However,...

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Autores principales: Pinto, Joana, Chappell, Michael A., Okell, Thomas W., Mezue, Melvin, Segerdahl, Andrew R., Tracey, Irene, Vilela, Pedro, Figueiredo, Patrícia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6972489/
https://www.ncbi.nlm.nih.gov/pubmed/31605558
http://dx.doi.org/10.1002/mrm.28000
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author Pinto, Joana
Chappell, Michael A.
Okell, Thomas W.
Mezue, Melvin
Segerdahl, Andrew R.
Tracey, Irene
Vilela, Pedro
Figueiredo, Patrícia
author_facet Pinto, Joana
Chappell, Michael A.
Okell, Thomas W.
Mezue, Melvin
Segerdahl, Andrew R.
Tracey, Irene
Vilela, Pedro
Figueiredo, Patrícia
author_sort Pinto, Joana
collection PubMed
description PURPOSE: To assess the impact of the different post‐processing options in the calibration of arterial spin labeling (ASL) data on perfusion quantification and its reproducibility. THEORY AND METHODS: Absolute quantification of perfusion measurements is one of the promises of ASL techniques. However, it is highly dependent on a calibration procedure that involves a complex processing pipeline for which no standardized procedure has been fully established. In this work, we systematically compare the main ASL calibration methods as well as various post‐processing calibration options, using 2 data sets acquired with the most common sequences, pulsed ASL and pseudo‐continuous ASL. RESULTS: Significant and sometimes large discrepancies in ASL perfusion quantification were obtained when using different post‐processing calibration options. Nevertheless, when using a set of theoretically based and carefully chosen options, only small differences were observed for both reference tissue and voxelwise methods. The voxelwise and white matter reference tissue methods were less sensitive to post‐processing options than the cerebrospinal fluid reference tissue method. However, white matter reference tissue calibration also produced poorer reproducibility results. Moreover, it may also not be an appropriate reference in case of white matter pathology. CONCLUSION: Poor post‐processing calibration options can lead to large errors in perfusion quantification, and a complete description of the calibration procedure should therefore be reported in ASL studies. Overall, our results further support the voxelwise calibration method proposed by the ASL white paper, particularly given the advantage of being relatively simple to implement and intrinsically correcting for the coil sensitivity profile.
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spelling pubmed-69724892020-01-27 Calibration of arterial spin labeling data—potential pitfalls in post‐processing Pinto, Joana Chappell, Michael A. Okell, Thomas W. Mezue, Melvin Segerdahl, Andrew R. Tracey, Irene Vilela, Pedro Figueiredo, Patrícia Magn Reson Med Full Papers—Imaging Methodology PURPOSE: To assess the impact of the different post‐processing options in the calibration of arterial spin labeling (ASL) data on perfusion quantification and its reproducibility. THEORY AND METHODS: Absolute quantification of perfusion measurements is one of the promises of ASL techniques. However, it is highly dependent on a calibration procedure that involves a complex processing pipeline for which no standardized procedure has been fully established. In this work, we systematically compare the main ASL calibration methods as well as various post‐processing calibration options, using 2 data sets acquired with the most common sequences, pulsed ASL and pseudo‐continuous ASL. RESULTS: Significant and sometimes large discrepancies in ASL perfusion quantification were obtained when using different post‐processing calibration options. Nevertheless, when using a set of theoretically based and carefully chosen options, only small differences were observed for both reference tissue and voxelwise methods. The voxelwise and white matter reference tissue methods were less sensitive to post‐processing options than the cerebrospinal fluid reference tissue method. However, white matter reference tissue calibration also produced poorer reproducibility results. Moreover, it may also not be an appropriate reference in case of white matter pathology. CONCLUSION: Poor post‐processing calibration options can lead to large errors in perfusion quantification, and a complete description of the calibration procedure should therefore be reported in ASL studies. Overall, our results further support the voxelwise calibration method proposed by the ASL white paper, particularly given the advantage of being relatively simple to implement and intrinsically correcting for the coil sensitivity profile. John Wiley and Sons Inc. 2019-10-12 2020-04 /pmc/articles/PMC6972489/ /pubmed/31605558 http://dx.doi.org/10.1002/mrm.28000 Text en © 2019 The Authors. Magnetic Resonance in Medicine published by Wiley Periodicals, Inc. on behalf of International Society for Magnetic Resonance in Medicine This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Full Papers—Imaging Methodology
Pinto, Joana
Chappell, Michael A.
Okell, Thomas W.
Mezue, Melvin
Segerdahl, Andrew R.
Tracey, Irene
Vilela, Pedro
Figueiredo, Patrícia
Calibration of arterial spin labeling data—potential pitfalls in post‐processing
title Calibration of arterial spin labeling data—potential pitfalls in post‐processing
title_full Calibration of arterial spin labeling data—potential pitfalls in post‐processing
title_fullStr Calibration of arterial spin labeling data—potential pitfalls in post‐processing
title_full_unstemmed Calibration of arterial spin labeling data—potential pitfalls in post‐processing
title_short Calibration of arterial spin labeling data—potential pitfalls in post‐processing
title_sort calibration of arterial spin labeling data—potential pitfalls in post‐processing
topic Full Papers—Imaging Methodology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6972489/
https://www.ncbi.nlm.nih.gov/pubmed/31605558
http://dx.doi.org/10.1002/mrm.28000
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