Cargando…

Nanoscale x-ray holotomography of human brain tissue with phase retrieval based on multienergy recordings

X-ray cone-beam holotomography of unstained tissue from the human central nervous system reveals details down to subcellular length scales. This visualization of variations in the electron density of the sample is based on phase-contrast techniques using intensities formed by self-interference of th...

Descripción completa

Detalles Bibliográficos
Autores principales: Robisch, Anna-Lena, Eckermann, Marina, Töpperwien, Mareike, van der Meer, Franziska, Stadelmann, Christine, Salditt, Tim
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Society of Photo-Optical Instrumentation Engineers 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6975131/
https://www.ncbi.nlm.nih.gov/pubmed/32016134
http://dx.doi.org/10.1117/1.JMI.7.1.013501
_version_ 1783490236759670784
author Robisch, Anna-Lena
Eckermann, Marina
Töpperwien, Mareike
van der Meer, Franziska
Stadelmann, Christine
Salditt, Tim
author_facet Robisch, Anna-Lena
Eckermann, Marina
Töpperwien, Mareike
van der Meer, Franziska
Stadelmann, Christine
Salditt, Tim
author_sort Robisch, Anna-Lena
collection PubMed
description X-ray cone-beam holotomography of unstained tissue from the human central nervous system reveals details down to subcellular length scales. This visualization of variations in the electron density of the sample is based on phase-contrast techniques using intensities formed by self-interference of the beam between object and detector. Phase retrieval inverts diffraction and overcomes the phase problem by constraints such as several measurements at different Fresnel numbers for a single projection. Therefore, the object-to-detector distance (defocus) can be varied. However, for cone-beam geometry, changing defocus changes magnification, which can be problematic in view of image processing and resolution. Alternatively, the photon energy can be altered (multi-E). Far from absorption edges, multi-E data yield the wavelength-independent electron density. We present the multi-E holotomography at the Göttingen Instrument for Nano-Imaging with X-Rays (GINIX) setup of the P10 beamline at Deutsches Elektronen-Synchrotron. The instrument is based on a combined optics of elliptical mirrors and an x-ray waveguide positioned in the focal plane for further coherence, spatial filtering, and high numerical aperture. Previous results showed the suitability of this instrument for nanoscale tomography of unstained brain tissue. We demonstrate that upon energy variation, the focal spot is stable enough for imaging. To this end, a double-crystal monochromator and automated alignment routines are required. Three tomograms of human brain tissue were recorded and jointly analyzed using phase retrieval based on the contrast transfer function formalism generalized to multiple photon energies. Variations of the electron density of the sample are successfully reconstructed.
format Online
Article
Text
id pubmed-6975131
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Society of Photo-Optical Instrumentation Engineers
record_format MEDLINE/PubMed
spelling pubmed-69751312021-01-22 Nanoscale x-ray holotomography of human brain tissue with phase retrieval based on multienergy recordings Robisch, Anna-Lena Eckermann, Marina Töpperwien, Mareike van der Meer, Franziska Stadelmann, Christine Salditt, Tim J Med Imaging (Bellingham) Physics of Medical Imaging X-ray cone-beam holotomography of unstained tissue from the human central nervous system reveals details down to subcellular length scales. This visualization of variations in the electron density of the sample is based on phase-contrast techniques using intensities formed by self-interference of the beam between object and detector. Phase retrieval inverts diffraction and overcomes the phase problem by constraints such as several measurements at different Fresnel numbers for a single projection. Therefore, the object-to-detector distance (defocus) can be varied. However, for cone-beam geometry, changing defocus changes magnification, which can be problematic in view of image processing and resolution. Alternatively, the photon energy can be altered (multi-E). Far from absorption edges, multi-E data yield the wavelength-independent electron density. We present the multi-E holotomography at the Göttingen Instrument for Nano-Imaging with X-Rays (GINIX) setup of the P10 beamline at Deutsches Elektronen-Synchrotron. The instrument is based on a combined optics of elliptical mirrors and an x-ray waveguide positioned in the focal plane for further coherence, spatial filtering, and high numerical aperture. Previous results showed the suitability of this instrument for nanoscale tomography of unstained brain tissue. We demonstrate that upon energy variation, the focal spot is stable enough for imaging. To this end, a double-crystal monochromator and automated alignment routines are required. Three tomograms of human brain tissue were recorded and jointly analyzed using phase retrieval based on the contrast transfer function formalism generalized to multiple photon energies. Variations of the electron density of the sample are successfully reconstructed. Society of Photo-Optical Instrumentation Engineers 2020-01-22 2020-01 /pmc/articles/PMC6975131/ /pubmed/32016134 http://dx.doi.org/10.1117/1.JMI.7.1.013501 Text en © 2020 The Authors https://creativecommons.org/licenses/by/4.0/ Published by SPIE under a Creative Commons Attribution 4.0 Unported License. Distribution or reproduction of this work in whole or in part requires full attribution of the original publication, including its DOI.
spellingShingle Physics of Medical Imaging
Robisch, Anna-Lena
Eckermann, Marina
Töpperwien, Mareike
van der Meer, Franziska
Stadelmann, Christine
Salditt, Tim
Nanoscale x-ray holotomography of human brain tissue with phase retrieval based on multienergy recordings
title Nanoscale x-ray holotomography of human brain tissue with phase retrieval based on multienergy recordings
title_full Nanoscale x-ray holotomography of human brain tissue with phase retrieval based on multienergy recordings
title_fullStr Nanoscale x-ray holotomography of human brain tissue with phase retrieval based on multienergy recordings
title_full_unstemmed Nanoscale x-ray holotomography of human brain tissue with phase retrieval based on multienergy recordings
title_short Nanoscale x-ray holotomography of human brain tissue with phase retrieval based on multienergy recordings
title_sort nanoscale x-ray holotomography of human brain tissue with phase retrieval based on multienergy recordings
topic Physics of Medical Imaging
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6975131/
https://www.ncbi.nlm.nih.gov/pubmed/32016134
http://dx.doi.org/10.1117/1.JMI.7.1.013501
work_keys_str_mv AT robischannalena nanoscalexrayholotomographyofhumanbraintissuewithphaseretrievalbasedonmultienergyrecordings
AT eckermannmarina nanoscalexrayholotomographyofhumanbraintissuewithphaseretrievalbasedonmultienergyrecordings
AT topperwienmareike nanoscalexrayholotomographyofhumanbraintissuewithphaseretrievalbasedonmultienergyrecordings
AT vandermeerfranziska nanoscalexrayholotomographyofhumanbraintissuewithphaseretrievalbasedonmultienergyrecordings
AT stadelmannchristine nanoscalexrayholotomographyofhumanbraintissuewithphaseretrievalbasedonmultienergyrecordings
AT salditttim nanoscalexrayholotomographyofhumanbraintissuewithphaseretrievalbasedonmultienergyrecordings