Cargando…
High-order radiomics features based on T2 FLAIR MRI predict multiple glioma immunohistochemical features: A more precise and personalized gliomas management
OBJECTIVE: To investigate the performance of high-order radiomics features and models based on T2-weighted fluid-attenuated inversion recovery (T2 FLAIR) in predicting the immunohistochemical biomarkers of glioma, in order to execute a non-invasive, more precise and personalized glioma disease manag...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6975558/ https://www.ncbi.nlm.nih.gov/pubmed/31968004 http://dx.doi.org/10.1371/journal.pone.0227703 |
_version_ | 1783490293404794880 |
---|---|
author | Li, Jing Liu, Siyun Qin, Ying Zhang, Yan Wang, Ning Liu, Huaijun |
author_facet | Li, Jing Liu, Siyun Qin, Ying Zhang, Yan Wang, Ning Liu, Huaijun |
author_sort | Li, Jing |
collection | PubMed |
description | OBJECTIVE: To investigate the performance of high-order radiomics features and models based on T2-weighted fluid-attenuated inversion recovery (T2 FLAIR) in predicting the immunohistochemical biomarkers of glioma, in order to execute a non-invasive, more precise and personalized glioma disease management. METHODS: 51 pathologically confirmed gliomas patients committed in our hospital from March 2015 to June 2018 were retrospective analysis, and Ki-67, vimentin, S-100 and CD34 immunohistochemical data were collected. The volumes of interest (VOIs) were manually sketched and the radiomics features were extracted. Feature reduction was performed by ANOVA+ Mann-Whiney, spearman correlation analysis, least absolute shrinkage and selection operator (LASSO) and Gradient descent algorithm (GBDT). SMOTE technique was used to solve the data bias between two groups. Comprehensive binary logistic regression models were established. Area under the ROC curves (AUC), sensitivity, specificity and accuracy were used to evaluate the predict performance of models. Models reliability were decided according to the standard net benefit of the decision curves. RESULTS: Four clusters of significant features were screened out and four predicting models were constructed. AUC of Ki-67, S-100, vimentin and CD34 models were 0.713, 0.923, 0.854 and 0.745, respectively. The sensitivities were 0.692, 0.893, 0.875 and 0.556, respectively. The specificities were: 0.667, 0.905, 0.722, and 0.875, with accuracy of 0.660, 0.898, 0.738, and 0.667, respectively. According to the decision curves, the Ki-67, S-100 and vimentin models had reference values. CONCLUSION: The radiomics features based on T2 FLAIR can potentially predict the Ki-67, S-100, vimentin and CD34 expression. Radiomics model were expected to be a computer-intelligent, non-invasive, accurate and personalized management method for gliomas. |
format | Online Article Text |
id | pubmed-6975558 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-69755582020-02-04 High-order radiomics features based on T2 FLAIR MRI predict multiple glioma immunohistochemical features: A more precise and personalized gliomas management Li, Jing Liu, Siyun Qin, Ying Zhang, Yan Wang, Ning Liu, Huaijun PLoS One Research Article OBJECTIVE: To investigate the performance of high-order radiomics features and models based on T2-weighted fluid-attenuated inversion recovery (T2 FLAIR) in predicting the immunohistochemical biomarkers of glioma, in order to execute a non-invasive, more precise and personalized glioma disease management. METHODS: 51 pathologically confirmed gliomas patients committed in our hospital from March 2015 to June 2018 were retrospective analysis, and Ki-67, vimentin, S-100 and CD34 immunohistochemical data were collected. The volumes of interest (VOIs) were manually sketched and the radiomics features were extracted. Feature reduction was performed by ANOVA+ Mann-Whiney, spearman correlation analysis, least absolute shrinkage and selection operator (LASSO) and Gradient descent algorithm (GBDT). SMOTE technique was used to solve the data bias between two groups. Comprehensive binary logistic regression models were established. Area under the ROC curves (AUC), sensitivity, specificity and accuracy were used to evaluate the predict performance of models. Models reliability were decided according to the standard net benefit of the decision curves. RESULTS: Four clusters of significant features were screened out and four predicting models were constructed. AUC of Ki-67, S-100, vimentin and CD34 models were 0.713, 0.923, 0.854 and 0.745, respectively. The sensitivities were 0.692, 0.893, 0.875 and 0.556, respectively. The specificities were: 0.667, 0.905, 0.722, and 0.875, with accuracy of 0.660, 0.898, 0.738, and 0.667, respectively. According to the decision curves, the Ki-67, S-100 and vimentin models had reference values. CONCLUSION: The radiomics features based on T2 FLAIR can potentially predict the Ki-67, S-100, vimentin and CD34 expression. Radiomics model were expected to be a computer-intelligent, non-invasive, accurate and personalized management method for gliomas. Public Library of Science 2020-01-22 /pmc/articles/PMC6975558/ /pubmed/31968004 http://dx.doi.org/10.1371/journal.pone.0227703 Text en © 2020 Li et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Li, Jing Liu, Siyun Qin, Ying Zhang, Yan Wang, Ning Liu, Huaijun High-order radiomics features based on T2 FLAIR MRI predict multiple glioma immunohistochemical features: A more precise and personalized gliomas management |
title | High-order radiomics features based on T2 FLAIR MRI predict multiple glioma immunohistochemical features: A more precise and personalized gliomas management |
title_full | High-order radiomics features based on T2 FLAIR MRI predict multiple glioma immunohistochemical features: A more precise and personalized gliomas management |
title_fullStr | High-order radiomics features based on T2 FLAIR MRI predict multiple glioma immunohistochemical features: A more precise and personalized gliomas management |
title_full_unstemmed | High-order radiomics features based on T2 FLAIR MRI predict multiple glioma immunohistochemical features: A more precise and personalized gliomas management |
title_short | High-order radiomics features based on T2 FLAIR MRI predict multiple glioma immunohistochemical features: A more precise and personalized gliomas management |
title_sort | high-order radiomics features based on t2 flair mri predict multiple glioma immunohistochemical features: a more precise and personalized gliomas management |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6975558/ https://www.ncbi.nlm.nih.gov/pubmed/31968004 http://dx.doi.org/10.1371/journal.pone.0227703 |
work_keys_str_mv | AT lijing highorderradiomicsfeaturesbasedont2flairmripredictmultiplegliomaimmunohistochemicalfeaturesamorepreciseandpersonalizedgliomasmanagement AT liusiyun highorderradiomicsfeaturesbasedont2flairmripredictmultiplegliomaimmunohistochemicalfeaturesamorepreciseandpersonalizedgliomasmanagement AT qinying highorderradiomicsfeaturesbasedont2flairmripredictmultiplegliomaimmunohistochemicalfeaturesamorepreciseandpersonalizedgliomasmanagement AT zhangyan highorderradiomicsfeaturesbasedont2flairmripredictmultiplegliomaimmunohistochemicalfeaturesamorepreciseandpersonalizedgliomasmanagement AT wangning highorderradiomicsfeaturesbasedont2flairmripredictmultiplegliomaimmunohistochemicalfeaturesamorepreciseandpersonalizedgliomasmanagement AT liuhuaijun highorderradiomicsfeaturesbasedont2flairmripredictmultiplegliomaimmunohistochemicalfeaturesamorepreciseandpersonalizedgliomasmanagement |