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Physiochemical Modeling of Vesicle Dynamics upon Osmotic Upshift

We modeled the relaxation dynamics of (lipid) vesicles upon osmotic upshift, taking into account volume variation, chemical reaction kinetics, and passive transport across the membrane. We focused on the relaxation kinetics upon addition of impermeable osmolytes such as KCl and membrane-permeable so...

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Detalles Bibliográficos
Autores principales: Gabba, Matteo, Poolman, Bert
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Biophysical Society 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6976812/
https://www.ncbi.nlm.nih.gov/pubmed/31948692
http://dx.doi.org/10.1016/j.bpj.2019.11.3383
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author Gabba, Matteo
Poolman, Bert
author_facet Gabba, Matteo
Poolman, Bert
author_sort Gabba, Matteo
collection PubMed
description We modeled the relaxation dynamics of (lipid) vesicles upon osmotic upshift, taking into account volume variation, chemical reaction kinetics, and passive transport across the membrane. We focused on the relaxation kinetics upon addition of impermeable osmolytes such as KCl and membrane-permeable solutes such as weak acids. We studied the effect of the most relevant physical parameters on the dynamic behavior of the system, as well as on the relaxation rates. We observe that 1) the dynamic complexity of the relaxation kinetics depends on the number of permeable species; 2) the permeability coefficients (P) and the weak acid strength (pK(a)-values) determine the dynamic behavior of the system; 3) the vesicle size does not affect the dynamics, but only the relaxation rates of the system; and 4) heterogeneities in the vesicle size provoke stretching of the relaxation curves. The model was successfully benchmarked for determining permeability coefficients by fitting of our experimental relaxation curves and by comparison of the data with literature values (in this issue of Biophysical Journal). To describe the dynamics of yeast cells upon osmotic upshift, we extended the model to account for turgor pressure and nonosmotic volume.
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spelling pubmed-69768122020-10-10 Physiochemical Modeling of Vesicle Dynamics upon Osmotic Upshift Gabba, Matteo Poolman, Bert Biophys J Articles We modeled the relaxation dynamics of (lipid) vesicles upon osmotic upshift, taking into account volume variation, chemical reaction kinetics, and passive transport across the membrane. We focused on the relaxation kinetics upon addition of impermeable osmolytes such as KCl and membrane-permeable solutes such as weak acids. We studied the effect of the most relevant physical parameters on the dynamic behavior of the system, as well as on the relaxation rates. We observe that 1) the dynamic complexity of the relaxation kinetics depends on the number of permeable species; 2) the permeability coefficients (P) and the weak acid strength (pK(a)-values) determine the dynamic behavior of the system; 3) the vesicle size does not affect the dynamics, but only the relaxation rates of the system; and 4) heterogeneities in the vesicle size provoke stretching of the relaxation curves. The model was successfully benchmarked for determining permeability coefficients by fitting of our experimental relaxation curves and by comparison of the data with literature values (in this issue of Biophysical Journal). To describe the dynamics of yeast cells upon osmotic upshift, we extended the model to account for turgor pressure and nonosmotic volume. The Biophysical Society 2020-01-21 2019-12-14 /pmc/articles/PMC6976812/ /pubmed/31948692 http://dx.doi.org/10.1016/j.bpj.2019.11.3383 Text en © 2019 Biophysical Society. http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Articles
Gabba, Matteo
Poolman, Bert
Physiochemical Modeling of Vesicle Dynamics upon Osmotic Upshift
title Physiochemical Modeling of Vesicle Dynamics upon Osmotic Upshift
title_full Physiochemical Modeling of Vesicle Dynamics upon Osmotic Upshift
title_fullStr Physiochemical Modeling of Vesicle Dynamics upon Osmotic Upshift
title_full_unstemmed Physiochemical Modeling of Vesicle Dynamics upon Osmotic Upshift
title_short Physiochemical Modeling of Vesicle Dynamics upon Osmotic Upshift
title_sort physiochemical modeling of vesicle dynamics upon osmotic upshift
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6976812/
https://www.ncbi.nlm.nih.gov/pubmed/31948692
http://dx.doi.org/10.1016/j.bpj.2019.11.3383
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